MirGeneDB ID | Isc-Mir-750 |
Family name |
MIR-750 (all species) |
Seed |
CAGAUCU |
Species |
Deer tick (Ixodes scapularis) |
MiRBase ID |
isc-mir-750
|
Paralogues |
|
Orthologues |
Aae-Mir-750
Asu-Mir-750
Bge-Mir-750
Bpl-Mir-750
Cgi-Mir-750
Csc-Mir-750-P8
Csc-Mir-750-P9
Cte-Mir-750
Dma-Mir-750
Dpu-Mir-750
Efe-Mir-750-P1
Efe-Mir-750-P2
Efe-Mir-750-P3
Esc-Mir-750
Hme-Mir-750
Lan-Mir-750
Lgi-Mir-750
Lpo-Mir-750-P5
Lpo-Mir-750-P6
Lpo-Mir-750-P7
Npo-Mir-750
Obi-Mir-750
Ovu-Mir-750
Sme-Mir-750
Tca-Mir-750
|
Node of Origin (locus) |
Protostomia
|
Node of Origin (family) |
Protostomia
|
Genome context (IscaWI) |
DS874548: 52982-53046 [-]
Ensembl
|
Precursor (pre-Mir +30nt flank) |
CCGGCAGCCAUGGGUUGGCCGUCCCACUCGAGUUGGAAGUGGGAUCCUGACACUUGAGCGCUGUCGGUGGUGCCAGAUCUAACUCUUCCAGCUCAGGUGAGGUACCGGUAUUUUCUGUCGACAGC
Get precursor sequence
|
Structure | 10 20 30 40 50 60
CCGGCAGCCAUGGGUUGGCC - - UC UG--| C A CUUGAGCG
GU CC CAC GAGUUGGAAG GGAUC UG CA C
CA GG GUG CUCGACCUUC UCUAG AC GU U
CGACAGCUGUCUUUUAUGGC U A GA UCAA^ - C GGUGGCUG
120 110 100 90 80 70 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | No |
Tissue expression
|
Al |
Mi |
Mi |
Mi |
Sa |
Sa |
Sa |
Sa |
To |
|
|
|
|
|
|
|
|
|
|
Star sequence |
Isc-Mir-750_5p* |
mirBase accession | None |
Sequence |
0- AGUUGGAAGUGGGAUCCUGACA -22
Get sequence
|
Mature sequence |
Isc-Mir-750_3p |
mirBase accession | MIMAT0012704 |
Sequence |
42- CCAGAUCUAACUCUUCCAGCUCA -65
Get sequence
|