MirGeneDB ID | Pfl-Mir-137-v1 |
Family name |
MIR-137 (all species) |
Seed |
AUUGCUU |
Species |
Ptychodera (Ptychodera flava) |
MiRBase ID |
|
Paralogues |
Pfl-Mir-137-v2
|
Orthologues |
Asu-Mir-137
Bfl-Mir-137
Cbr-Mir-137
Cel-Mir-137
Cgi-Mir-137
Cte-Mir-137
Dan-Mir-137
Dma-Mir-137
Dme-Mir-137
Dmo-Mir-137
Dpu-Mir-137
Dsi-Mir-137
Dya-Mir-137
Ebu-Mir-137
Esc-Mir-137
Hme-Mir-137
Isc-Mir-137
Lan-Mir-137
Lgi-Mir-137
Obi-Mir-137
Ovu-Mir-137-v1
Pmi-Mir-137-v1
Sko-Mir-137
Spu-Mir-137
Tca-Mir-137-v1
Xbo-Mir-137
|
Node of Origin (locus) |
Bilateria
|
Node of Origin (family) |
Bilateria
|
Genome context (Pfl) |
LD343696.1: 352495-352552 [-]
|
Precursor (pre-Mir +30nt flank) |
CGGACAGAGCAGGCUAUGCACGUGUCAGUCACGCGUAUUCUCGGGUUGAUAAUACAUUCGUGAUGUUAUUGCUUGAGAAUACACGUAGCUCACUCGAUGCUCGAAACAACUCGGCACG
Get precursor sequence
|
Structure | 10 20 30 40 50
CGGACAGAGCAGGCUAU- -| U C UC C U ACAUU
GCA CG GU AG ACG GUAUUCUCGGGU GAUAAU \
CGU GC CA UC UGC CAUAAGAGUUCG UUAUUG C
GCACGGCUCAACAAAGCU A^ U C GA A - UAGUG
110 100 90 80 70 60 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | UG at 5p(-14) |
Tissue expression
|
|
Star sequence |
Pfl-Mir-137-v1_5p* |
mirBase accession | None |
Sequence |
0- ACGCGUAUUCUCGGGUUGAUAAU -23
Get sequence
|
Mature sequence |
Pfl-Mir-137-v1_3p |
mirBase accession | None |
Sequence |
36- UAUUGCUUGAGAAUACACGUAG -58
Get sequence
|