MirGeneDB 3.0

22 microRNA genes with node of origin H. rufescens
Sort by genome coordinates Motifs
MirGeneDB ID ▲ MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) Iso­miR 3' NTU  UG  UGUG CNNC
Hru-Mir-2-o51 None MIR-2 AUCACAG None None JALGQA010000019.1 17033823 17033880 + H. rufescens Protostomia No 1
Hru-Mir-2-o52 None MIR-2 AUCACAG None None JALGQA010000019.1 17033972 17034029 + H. rufescens Protostomia No 1 1
Hru-Mir-2-o53 None MIR-2 AUCACAG None None JALGQA010000019.1 17034102 17034159 + H. rufescens Protostomia No 1
Hru-Mir-2-o54 None MIR-2 AUCACAG None None JALGQA010000019.1 17034273 17034331 + H. rufescens Protostomia No 1 1
Hru-Mir-2-o55 None MIR-2 CACAGCC None None JALGQA010000019.1 17033087 17033148 + H. rufescens Protostomia No
Hru-Mir-92-o92 None MIR-92 AUUGCAC None None JALGQA010000014.1 5911876 5911932 + H. rufescens Bilateria No 1
Hru-Mir-92-o93 None MIR-92 AUUGCAC None None JALGQA010000014.1 5912798 5912858 + H. rufescens Bilateria No 1
Hru-Mir-92-o94 None MIR-92 AUUGCAC None None JALGQA010000014.1 5917110 5917167 + H. rufescens Bilateria No 1 1
Hru-Mir-92-o95 None MIR-92 AUUGCAC None None JALGQA010000014.1 5919490 5919546 + H. rufescens Bilateria No 1
Hru-Mir-184-o5 None MIR-184 GGACGGA None None JALGQA010000014.1 18032507 18032564 - H. rufescens Nephrozoa No 1 1
Hru-Mir-184-o6 None MIR-184 GGACGGA None None JALGQA010000014.1 18030619 18030676 - H. rufescens Nephrozoa No 1 1
Hru-Mir-210-P23 None MIR-210 UGUGCGU None None JALGQA010000006.1 28697465 28697524 + H. rufescens Bilateria No 1
Hru-Mir-210-P24 None MIR-210 UGUGCGU None None JALGQA010000006.1 28646002 28646060 + H. rufescens Bilateria No 1
Hru-Mir-242-P3a None MIR-242 UGCGUAG None None JALGQA010000016.1 16932597 16932652 - H. rufescens Nephrozoa Unknown 1 1 1
Hru-Mir-242-P3b None MIR-242 UGCGUAG None None JALGQA010000016.1 16931077 16931132 - H. rufescens Nephrozoa Unknown 1 1 1
Hru-Mir-1986-P1 None MIR-1986 GGAUUUC None None JALGQA010000006.1 52828715 52828771 - H. rufescens Lophotrochozoa No 1
Hru-Mir-1986-P2 None MIR-1986 GGAUUUC None None JALGQA010000006.1 52827721 52827778 - H. rufescens Lophotrochozoa No 1
Hru-Mir-1989-P4a None MIR-1989 CAGCUGU None None JALGQA010000006.1 51473548 51473604 - H. rufescens Platytrochozoa Unknown 1 1
Hru-Mir-1989-P4b None MIR-1989 CAGCUGU None None JALGQA010000006.1 51636455 51636511 - H. rufescens Platytrochozoa Unknown 1 1
Hru-Novel-1 None HRU-NOVEL-1 UUUUUAC None None JALGQA010000055.1 1701472 1701529 - H. rufescens H. rufescens No 1
Hru-Novel-2 None HRU-NOVEL-2 ACUCCCG None None gb|JALGQB010000024.1|:6030563-6030826 91 144 + H. rufescens H. rufescens Unknown 1
Hru-Novel-3 None HRU-NOVEL-3 GGUCAGU None None JALGQA010000021.1 12337555 12337613 - H. rufescens H. rufescens Unknown 1

(red - mature/co-mature, blue - star)

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