| MirGeneDB ID | Aca-Mir-9574 |
|---|
| Family name |
MIR-9574 (all species) |
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| Species |
Green anole lizard (Anolis carolinensis) |
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| MiRBase ID |
aca-mir-9574
|
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| Paralogues |
|
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| Orthologues |
|
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| Node of Origin (locus) |
A. carolinensis
|
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| Node of Origin (family) |
A. carolinensis
|
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Genome context
(anoCar2) |
2: 141270233-141270287 [+]
UCSC
Ensembl
|
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| Seed |
UUCAUCU |
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Precursor
(pre-Mir +30nt flank) |
UCUUCCUCAUCCUUUGUUUCCCCAGCCUUCUUUCAUCUCUGAAAUGCAUAUGUUUUAGCACCAUUUGUAUUUCAGAGAUGGAGGGCCGAAGAAACGCAUACGCUUGAUAUUGAAU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
UCUUCCUCAUCCUUUGU-----| CCCA UUU U UUUU
UUC GCCUUC CAUCUCUGAAAUGCA AUG \
AAG CGGGAG GUAGAGACUUUAUGU UAC A
UAAGUUAUAGUUCGCAUACGCA^ AAGC --- U CACG
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | No |
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Tissue expression
|
|
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| Mature sequence |
Aca-Mir-9574_5p |
| mirBase accession | MIMAT0037582 |
|---|
| Sequence |
0- UUUCAUCUCUGAAAUGCAUAUG -22
Get sequence
|
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| Star sequence |
Aca-Mir-9574_3p* |
| mirBase accession | MIMAT0037583 |
|---|
| Sequence |
33- UUUGUAUUUCAGAGAUGGAGGG -55
Get sequence
|
|---|
