| MirGeneDB ID | Adi-Novel-1 |
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| Family name |
ADI-NOVEL-1 (all species) |
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| Species |
Stony coral (Acropora digitifera) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
A. digitifera
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| Node of Origin (family) |
A. digitifera
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Genome context
(GCA_000222465.2_Adig_1.1_genomic) |
DF971053.1: 27592-27645 [-]
Ensembl
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| Seed |
UCCUGAA |
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Precursor
(pre-Mir +30nt flank) |
UUCUUGUACAUGUUACAUCUUUGAUGGAAAAUGCGCAAGAGCAGUCAAGACUGUUUAUUCAUUCCUGAAAGCUCUUGUGAAUAUUCCUUCACAGAAACACAACCGAUAAUGUAA
Get precursor sequence
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| Structure | 10 20 30 40 50
UUCUUGUACAUGUUACA--| U U A G AG A C UU
UCU UGA GGAA AU CGCAAGAGC UCA GA UG U
AGA ACU CCUU UA GUGUUCUCG AGU CU AC A
AAUGUAAUAGCCAACACAA^ C U A A AA C U UU
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
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| 3' NTU |
No
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
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| Ad |
Ad |
Ad |
Ad |
Ad |
Ad |
Ad |
La |
La |
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| Star sequence |
Adi-Novel-1_5p* |
| mirBase accession | None |
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| Sequence |
0- AUGCGCAAGAGCAGUCAAGACUG -23
Get sequence
|
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| Mature sequence |
Adi-Novel-1_3p |
| mirBase accession | None |
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| Sequence |
31- UUCCUGAAAGCUCUUGUGAAUAU -54
Get sequence
|
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