MirGeneDB 2.1

MirGeneDB ID

Bge-Mir-22-P2

Family name MIR-22 (all species)
Seed AGCUGCC
Species Cockroach (Blattella germanica)
MiRBase ID
Paralogues
Orthologues Aae-Mir-22-P2  Asu-Mir-22-P2  Cbr-Mir-22-P2-v1  Cbr-Mir-22-P2-v2  Cel-Mir-22-P2  Cgi-Mir-22-P2  Csc-Mir-22-P2  Cte-Mir-22-P2  Dan-Mir-22-P2  Dma-Mir-22-P2  Dme-Mir-22-P2  Dmo-Mir-22-P2  Dpu-Mir-22-P2  Dsi-Mir-22-P2  Dya-Mir-22-P2  Esc-Mir-22-P2  Hme-Mir-22-P2  Isc-Mir-22-P2  Lan-Mir-22-P2  Lgi-Mir-22-P2  Lpo-Mir-22-P2a  Lpo-Mir-22-P2b  Lpo-Mir-22-P2c  Lpo-Mir-22-P2d  Npo-Mir-22-P2  Ovu-Mir-22-P2  Pfl-Mir-22-o2  Pmi-Mir-22-o2  Sko-Mir-22-o2  Spu-Mir-22-o2  Tca-Mir-22-P2-v1  Tca-Mir-22-P2-v2 
Node of Origin (locus) Bilateria
Node of Origin (family) Bilateria
Genome context
(Bger_2.0)
KZ616253.1: 43902-43964 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
GCAGCAUAGCAGUUCAGCUCUACCUCGGUGCGGCUCAUCACCGGGCAUCUUGCGUGACGUUUGACUCUGCAAGCUGCCUAGUGAAGGGCAACAUUGGGGUGGAGCCUUACAACCAAUUGAAGA
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Structure
        10          20        30        40        50        60 
GCAGCAUAGCAGUUCAG--|            CG    A    CG    U     GUGACGU 
                   CUCUACCUCGGUG  GCUC UCAC  GGCA CUUGC       \
                   GAGGUGGGGUUAC  CGGG AGUG  CCGU GAACG       U
AGAAGUUAACCAACAUUCC^            AA    A    AU    C     UCUCAGU 
 120       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
 +
Ad Ad Ny Ny Ny Ny Ny Ny Ny Ny Ov Co Co Em Em Em Em Em Em Em Em Em Em No No
Star sequence

Bge-Mir-22-P2_5p*

mirBase accessionNone
Sequence
0- CGGCUCAUCACCGGGCAUCUUGC -23
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Mature sequence

Bge-Mir-22-P2_3p

mirBase accessionNone
Sequence
40- AAGCUGCCUAGUGAAGGGCAACA -63
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