| MirGeneDB ID | Bge-Mir-3049 |
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| Family name |
MIR-3049 (all species) |
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| Seed |
CGGGAAG |
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| Species |
Cockroach (Blattella germanica) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
Tca-Mir-3049
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| Node of Origin (locus) |
Neoptera
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| Node of Origin (family) |
Neoptera
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Genome context
(Bger_2.0) |
KZ614976.1: 254390-254450 [+]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
AUGACCCGGAUGGACUGAGCCUUCGCUGAGUCGGGAAGGCAGUUGCGGCGGAUUGUGACGUCAGACGAGUCCGUCCAACUCCUUUCCGUCUCGGCGUCGGGCGUCAUCAUUAACACCUACU
Get precursor sequence
|
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| Structure | 10 20 30 40 50 60
AUGACCCGGAUGGACUGA- U-| U C C GUGACG
GCCU CGCUGAG CGGGAAGG AGUUG GGCGGAUU \
CGGG GCGGCUC GCCUUUCC UCAAC CUGCCUGA U
UCAUCCACAAUUACUACUG CU^ U - - GCAGAC
. 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
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| 3' NTU |
Unknown
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| Motifs | UGUG in loop |
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Tissue expression
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| Ad |
Ad |
Ny |
Ny |
Ny |
Ny |
Ny |
Ny |
Ny |
Ny |
Ov |
Co |
Co |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
No |
No |
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| Mature sequence |
Bge-Mir-3049_5p |
| mirBase accession | None |
|---|
| Sequence |
0- UCGGGAAGGCAGUUGCGGCGGAUU -24
Get sequence
|
|---|
| Star sequence |
Bge-Mir-3049_3p* |
| mirBase accession | None |
|---|
| Sequence |
39- UCCGUCCAACUCCUUUCCGUCU -61
Get sequence
|
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