MirGeneDB 2.1

MirGeneDB ID

Bge-Novel-12

Family name BGE-NOVEL-12 (all species)
Seed UACGAAC
Species Cockroach (Blattella germanica)
MiRBase ID
Paralogues
Orthologues
Node of Origin (locus) B. germanica
Node of Origin (family) B. germanica
Genome context
(Bger_2.0)
KZ614523.1: 1698465-1698524 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
ACACAGAGGAGUUUAGGUCUUCCCACGUAUCGAUGUCAUUUUGGUUCGUAAUGUUGUAAUUGUCUCACUACGAACCAGAAUGACAUCGCGUUGUUCGAAGACAUUUGAUGCUGGAACCAC
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Structure
        10          20        30        40        50         
ACACAGAGGAGUUUAGG--|    CC   UAU                    A  UUGUA 
                   UCUUC  ACG   CGAUGUCAUUUUGGUUCGUA UG     A
                   AGAAG  UGU   GCUACAGUAAGACCAAGCAU AC     U
CACCAAGGUCGUAGUUUAC^    CU   UGC                    C  UCUGU 
.       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
Ad Ad Ny Ny Ny Ny Ny Ny Ny Ny Ov Co Co Em Em Em Em Em Em Em Em Em Em No No
Star sequence

Bge-Novel-12_5p*

mirBase accessionNone
Sequence
0- CGAUGUCAUUUUGGUUCGUAAUG -23
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Mature sequence

Bge-Novel-12_3p

mirBase accessionNone
Sequence
37- CUACGAACCAGAAUGACAUCGCG -60
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