MirGeneDB ID | Bge-Novel-17 |
Family name |
BGE-NOVEL-17 (all species) |
Seed |
CUGCGAC |
Species |
Cockroach (Blattella germanica) |
MiRBase ID |
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Paralogues |
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Orthologues |
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Node of Origin (locus) |
B. germanica
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Node of Origin (family) |
B. germanica
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Genome context (Bger_2.0) |
KZ614569.1: 131301-131358 [-]
Ensembl
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Precursor (pre-Mir +30nt flank) |
UACAAGUUAACAUGUGUAGCACAGUAGGAUUCUGCGACAAUUUACUGUUAGGUGGAAAUAAUUCUCUGACAGUCAUUUGUAGCAGUAUCUUCCUGUGUUCUAUCUCCUGAUGGAACAU
Get precursor sequence
|
Structure | 10 20 30 40 50
UACAAGUUAACAUGUGU--| U U G UUU UGGAA
AGCACAG AGGAU CUGC ACAA ACUGUUAGG A
UUGUGUC UUCUA GACG UGUU UGACAGUCU U
UACAAGGUAGUCCUCUAUC^ C U A UAC CUUAA
110 100 90 80 70 60 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
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Motifs | CNNC at 3p(+17) |
Tissue expression
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Ad |
Ad |
Ny |
Ny |
Ny |
Ny |
Ny |
Ny |
Ny |
Ny |
Ov |
Co |
Co |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
No |
No |
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Mature sequence |
Bge-Novel-17_5p |
mirBase accession | None |
Sequence |
0- UCUGCGACAAUUUACUGUUAGG -22
Get sequence
|
Star sequence |
Bge-Novel-17_3p* |
mirBase accession | None |
Sequence |
36- UGACAGUCAUUUGUAGCAGUAU -58
Get sequence
|