MirGeneDB 2.1

MirGeneDB ID

Bge-Novel-18

Family name BGE-NOVEL-18 (all species)
Seed AUAUAAA
Species Cockroach (Blattella germanica)
MiRBase ID
Paralogues
Orthologues
Node of Origin (locus) B. germanica
Node of Origin (family) B. germanica
Genome context
(Bger_2.0)
KZ616140.1: 57073-57133 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
UAAUGUAAUAAAAUUAGGUACAGUUGGUUUCAUAUAAAUUGUCUGCGACACUCAUUGAAUUACUACGGGUGUCGCGGUCAUUUUAUUUGGAAUCAACUAUACUUACCUACAUUGGUGACAU
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Structure
        10          20        30        40        50          
UAAUGUAAUAAAAUUAG--|  C           U     U  U          CAUUGAA 
                   GUA AGUUGGUUUCA AUAAA UG CUGCGACACU       \
                   CAU UCAACUAAGGU UAUUU AC GGCGCUGUGG       U
UACAGUGGUUACAUCCAUU^  A           U     U  U          GCAUCAU 
 .       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
Ad Ad Ny Ny Ny Ny Ny Ny Ny Ny Ov Co Co Em Em Em Em Em Em Em Em Em Em No No
Mature sequence

Bge-Novel-18_5p

mirBase accessionNone
Sequence
0- CAUAUAAAUUGUCUGCGACACU -22
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Co-mature sequence

Bge-Novel-18_3p

mirBase accessionNone
Sequence
39- UGUCGCGGUCAUUUUAUUUGGA -61
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