MirGeneDB ID | Bge-Novel-24 |
Family name |
BGE-NOVEL-24 (all species) |
Seed |
AUAGGCG |
Species |
Cockroach (Blattella germanica) |
MiRBase ID |
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Paralogues |
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Orthologues |
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Node of Origin (locus) |
B. germanica
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Node of Origin (family) |
B. germanica
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Genome context (Bger_2.0) |
KZ615746.1: 116941-117000 [-]
Ensembl
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Precursor (pre-Mir +30nt flank) |
AAAAGAAGACAUGAAGUCUCUUUUAUCUGGAAGGGGAAGUGGUGCGUUAGAUUUGCUUUAAAUUAUGUCAUAGGCGCUAUUUCCUCUGCCAGAAGGAAGAGUUCAUUCUUACUGGCUGCU
Get precursor sequence
|
Structure | 10 20 30 40 50
AAAAGAAGACAUGAAGU--| UA A G - UUGCUU
CUCUUU UCUGG AGGGGAAGUGGUGC UUA GAU U
GAGAAG AGACC UCUCCUUUAUCGCG GAU CUG A
UCGUCGGUCAUUCUUACUU^ GA G - A UAUUAA
. 110 100 90 80 70 60 |
Deep sequencing |
Go to detailed chart
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3' NTU |
No
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Motifs | No |
Tissue expression
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Ad |
Ad |
Ny |
Ny |
Ny |
Ny |
Ny |
Ny |
Ny |
Ny |
Ov |
Co |
Co |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
No |
No |
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Star sequence |
Bge-Novel-24_5p* |
mirBase accession | None |
Sequence |
0- AAGGGGAAGUGGUGCGUUAGAU -22
Get sequence
|
Mature sequence |
Bge-Novel-24_3p |
mirBase accession | None |
Sequence |
38- CAUAGGCGCUAUUUCCUCUGCC -60
Get sequence
|