MirGeneDB 2.1

MirGeneDB ID

Bge-Novel-5

Family name BGE-NOVEL-5 (all species)
Seed GGACUUC
Species Cockroach (Blattella germanica)
MiRBase ID
Paralogues
Orthologues
Node of Origin (locus) B. germanica
Node of Origin (family) B. germanica
Genome context
(Bger_2.0)
KZ614421.1: 901262-901321 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
CAGCCCUCGUCAAGGGUUUUAAAAAGACCAUGGACUUCAUCCUCAGGGAUUCGUUGUUCUGCUGUAGAACUCUAGAAGAUGAAGGCCAUGGCCCAUUGAUAGCGCUCGAGGAACGAAUUU
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Structure
        10        20          30        40         50         
CAGCCCUCGUCAAGGGUUUUAAAAAGA--      A       C  -|   A   GUUGUU 
                             CCAUGG CUUCAUC UC AGGG UUC      C
                             GGUACC GAAGUAG AG UCUC AAG      U
UUUAAGCAAGGAGCUCGCGAUAGUUACCC      G       A  A^   -   AUGUCG 
.       110       100        90        80        70         60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
Ad Ad Ny Ny Ny Ny Ny Ny Ny Ny Ov Co Co Em Em Em Em Em Em Em Em Em Em No No
Mature sequence

Bge-Novel-5_5p

mirBase accessionNone
Sequence
0- UGGACUUCAUCCUCAGGGAUUC -22
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Star sequence

Bge-Novel-5_3p*

mirBase accessionNone
Sequence
38- ACUCUAGAAGAUGAAGGCCAUG -60
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