| MirGeneDB ID | Cpo-Mir-324 |
|---|
| Family name |
MIR-324 (all species) |
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| Seed |
GCAUCCC |
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| Species |
Guinea pig (Cavia porcellus) |
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| MiRBase ID |
cpo-mir-324
|
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| Paralogues |
|
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| Orthologues |
Bta-Mir-324
Cfa-Mir-324
Dno-Mir-324
Ete-Mir-324
Hsa-Mir-324
Mml-Mir-324
Mmu-Mir-324
Ocu-Mir-324
Rno-Mir-324
|
|---|
| Node of Origin (locus) |
Eutheria
|
|---|
| Node of Origin (family) |
Eutheria
|
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Genome context
(cavPor3) |
scaffold_61: 9396938-9396994 [+]
UCSC
|
|---|
Precursor
(pre-Mir +30nt flank) |
CCUUCAGAAGCUGAGCUGACUGUGCCUCCCCGCAUCCCCUAGGGCAUUGGUGUAAAGCUGGAGACCCACUGCCCCAGGUGCUGCUGGGGGUUGCAGUCUGACUCUACAGGAGACCCU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
CCUUCAGAAGCUGAGCU--| GC C UCC A U U AAAG
GACUGU CUCCC GCA CCU GGGCA UGG GU C
CUGACG GGGGG CGU GGA CCCGU ACC CA U
UCCCAGAGGACAUCUCAGU^ UU U CGU C C - GAGG
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| Comment | There is a second Dicer cut -2 on both arms. |
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| 3' NTU |
No
|
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| Motifs | UG at 5p(-14), CNNC at 3p(+17) |
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Tissue expression
|
|
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| Mature sequence |
Cpo-Mir-324_5p |
| mirBase accession | MIMAT0047158 |
|---|
| Sequence |
0- CGCAUCCCCUAGGGCAUUGGUGU -23
Get sequence
|
|---|
| Star sequence |
Cpo-Mir-324_3p* |
| mirBase accession | MIMAT0047159 |
|---|
| Sequence |
35- CCACUGCCCCAGGUGCUGCUGG -57
Get sequence
|
|---|
