MirGeneDB ID | Csc-Mir-193-P2v |
Family name |
MIR-193 (all species) |
Seed |
AAUGCCC |
Species |
Arizona bark scorpion (Centruroides sculpturatus) |
MiRBase ID |
|
Paralogues |
Csc-Mir-193-P1u
|
Orthologues |
Bge-Mir-193-P2
Cbr-Mir-193-P2-v1
Cbr-Mir-193-P2-v2
Cel-Mir-193-P2-v1
Cel-Mir-193-P2-v2
Cgi-Mir-193-P2
Cte-Mir-193-P2
Ebu-Mir-193-P2
Hme-Mir-193-P2
Lgi-Mir-193-P2
Pfl-Mir-193-P2
Pma-Mir-193-P2
Pmi-Mir-193-P2
Sko-Mir-193-P2
Spu-Mir-193-P2
Tca-Mir-193-P2
Xbo-Mir-193-P2
|
Node of Origin (locus) |
C. sculpturatus
|
Node of Origin (family) |
Bilateria
|
Genome context (GCF_000671375.1_CSC) |
NW_019387724.1: 416-476 [+]
Ensembl
|
Precursor (pre-Mir +30nt flank) |
UAUCACCUUUUAUGGGAGCUGAAGCAGAAAUGGGGUUUCUAAUCGGCAUUUACCAUGACAAAUUUUAUGCAAUGCCCUUGGAAAUCCCAAAUAUGCUCAGCAAUUUCGUCGACCGAAUCUC
Get precursor sequence
|
Structure | 10 20 30 40 50 60
UAUCACCUUUUAUGGGA---| A GAAA UC UACCAUGAC
GCUGA GCA UGGGGUUUCUAA GGCAUU A
CGACU CGU ACCCUAAAGGUU CCGUAA A
CUCUAAGCCAGCUGCUUUAA^ - AUAA C- CGUAUUUUA
. 110 100 90 80 70 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
Unknown
|
Motifs | CNNC at 3p(+17) |
Tissue expression
|
|
Star sequence |
Csc-Mir-193-P2v_5p* |
mirBase accession | None |
Sequence |
0- UGGGGUUUCUAAUCGGCAUUUAC -23
Get sequence
|
Mature sequence |
Csc-Mir-193-P2v_3p |
mirBase accession | None |
Sequence |
39- CAAUGCCCUUGGAAAUCCCAAA -61
Get sequence
|