MirGeneDB 2.1

MirGeneDB ID

Csc-Mir-193-P2v

Family name MIR-193 (all species)
Seed AAUGCCC
Species Arizona bark scorpion (Centruroides sculpturatus)
MiRBase ID
Paralogues Csc-Mir-193-P1u 
Orthologues Bge-Mir-193-P2  Cbr-Mir-193-P2-v1  Cbr-Mir-193-P2-v2  Cel-Mir-193-P2-v1  Cel-Mir-193-P2-v2  Cgi-Mir-193-P2  Cte-Mir-193-P2  Ebu-Mir-193-P2  Hme-Mir-193-P2  Lgi-Mir-193-P2  Pfl-Mir-193-P2  Pma-Mir-193-P2  Pmi-Mir-193-P2  Sko-Mir-193-P2  Spu-Mir-193-P2  Tca-Mir-193-P2  Xbo-Mir-193-P2 
Node of Origin (locus) C. sculpturatus
Node of Origin (family) Bilateria
Genome context
(GCF_000671375.1_CSC)
NW_019387724.1: 416-476 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
UAUCACCUUUUAUGGGAGCUGAAGCAGAAAUGGGGUUUCUAAUCGGCAUUUACCAUGACAAAUUUUAUGCAAUGCCCUUGGAAAUCCCAAAUAUGCUCAGCAAUUUCGUCGACCGAAUCUC
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Structure
        10           20        30        40        50        60
UAUCACCUUUUAUGGGA---|    A   GAAA            UC      UACCAUGAC 
                    GCUGA GCA    UGGGGUUUCUAA  GGCAUU         A
                    CGACU CGU    ACCCUAAAGGUU  CCGUAA         A
CUCUAAGCCAGCUGCUUUAA^    -   AUAA            C-      CGUAUUUUA 
 .       110       100         90        80         70
Deep sequencing
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3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
 +
Fe Fe Fe Fe Ma Ma Ma
Star sequence

Csc-Mir-193-P2v_5p*

mirBase accessionNone
Sequence
0- UGGGGUUUCUAAUCGGCAUUUAC -23
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Mature sequence

Csc-Mir-193-P2v_3p

mirBase accessionNone
Sequence
39- CAAUGCCCUUGGAAAUCCCAAA -61
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