MirGeneDB ID | Csc-Mir-276-P10 |
Family name |
MIR-276 (all species) |
Seed |
AGGAACU |
Species |
Arizona bark scorpion (Centruroides sculpturatus) |
MiRBase ID |
|
Paralogues |
Csc-Mir-276-P11a
Csc-Mir-276-P11b
|
Orthologues |
Bge-Mir-276
Dma-Mir-276
Dpu-Mir-276
Hme-Mir-276
Isc-Mir-276
Tca-Mir-276
|
Node of Origin (locus) |
C. sculpturatus
|
Node of Origin (family) |
Arthropoda
|
Genome context (GCF_000671375.1_CSC) |
NW_019384353.1: 622467-622524 [+]
Ensembl
|
Precursor (pre-Mir +30nt flank) |
UCGUCCGUCUACAAGUUUGGAAUUAUCGUGAGCGAGGUAUGGAGUUCUUACUGUGCACAAAACAGGUAGGAACUUCAUACCAUGCUCGCGAUGACUUCAAAUAACCCUUCUGUGGAUU
Get precursor sequence
|
Structure | 10 20 30 40 50
UCGUCCGUCUACAAGUU--| A A GUGCA
UGGA UUAUCGUGAGCG GGUAUGGAGUUCUUACU C
ACUU AGUAGCGCUCGU CCAUACUUCAAGGAUGG A
UUAGGUGUCUUCCCAAUAA^ C A ACAAA
110 100 90 80 70 60 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
Unknown
|
Motifs | UGUG in loop |
Tissue expression
|
|
Star sequence |
Csc-Mir-276-P10_5p* |
mirBase accession | None |
Sequence |
0- AGCGAGGUAUGGAGUUCUUACU -22
Get sequence
|
Mature sequence |
Csc-Mir-276-P10_3p |
mirBase accession | None |
Sequence |
36- UAGGAACUUCAUACCAUGCUCG -58
Get sequence
|