MirGeneDB 2.1

MirGeneDB ID

Csc-Mir-5735

Family name MIR-5735 (all species)
Seed GGACAAC
Species Arizona bark scorpion (Centruroides sculpturatus)
MiRBase ID
Paralogues
Orthologues Lpo-Mir-5735-P1  Lpo-Mir-5735-P2 
Node of Origin (locus) Chelicerata
Node of Origin (family) Chelicerata
Genome context
(GCF_000671375.1_CSC)
NW_019385159.1: 88354-88412 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
UAUAUAAACUUCACGAAAAUGGUCUGCAGCACCUUUCUCAUGUUGUCUACUGUGUCUAUCGAAAUCAGUGGACAACAAGAUAAAGGCGUUGUAGUUCAUUACUUUUCAGUCGUUGUAAG
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Structure
        10          20        30        40        50         
UAUAUAAACUUCACGAA--|   GU       A     C  A           GUGUCUA 
                   AAUG  CUGCAGC CCUUU UC UGUUGUCUACU       \
                   UUAC  GAUGUUG GGAAA AG ACAACAGGUGA       U
GAAUGUUGCUGACUUUUCA^   UU       C     U  A           CUAAAGC 
       110       100        90        80        70        60
Deep sequencing
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3' NTU Unknown
MotifsUGUG in loop
Tissue expression
 +
Fe Fe Fe Fe Ma Ma Ma
Star sequence

Csc-Mir-5735_5p*

mirBase accessionNone
Sequence
0- ACCUUUCUCAUGUUGUCUACU -21
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Mature sequence

Csc-Mir-5735_3p

mirBase accessionNone
Sequence
38- UGGACAACAAGAUAAAGGCGU -59
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