MirGeneDB ID | Csc-Mir-5735 |
Family name |
MIR-5735 (all species) |
Seed |
GGACAAC |
Species |
Arizona bark scorpion (Centruroides sculpturatus) |
MiRBase ID |
|
Paralogues |
|
Orthologues |
Lpo-Mir-5735-P1
Lpo-Mir-5735-P2
|
Node of Origin (locus) |
Chelicerata
|
Node of Origin (family) |
Chelicerata
|
Genome context (GCF_000671375.1_CSC) |
NW_019385159.1: 88354-88412 [-]
Ensembl
|
Precursor (pre-Mir +30nt flank) |
UAUAUAAACUUCACGAAAAUGGUCUGCAGCACCUUUCUCAUGUUGUCUACUGUGUCUAUCGAAAUCAGUGGACAACAAGAUAAAGGCGUUGUAGUUCAUUACUUUUCAGUCGUUGUAAG
Get precursor sequence
|
Structure | 10 20 30 40 50
UAUAUAAACUUCACGAA--| GU A C A GUGUCUA
AAUG CUGCAGC CCUUU UC UGUUGUCUACU \
UUAC GAUGUUG GGAAA AG ACAACAGGUGA U
GAAUGUUGCUGACUUUUCA^ UU C U A CUAAAGC
110 100 90 80 70 60 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
Unknown
|
Motifs | UGUG in loop |
Tissue expression
|
|
Star sequence |
Csc-Mir-5735_5p* |
mirBase accession | None |
Sequence |
0- ACCUUUCUCAUGUUGUCUACU -21
Get sequence
|
Mature sequence |
Csc-Mir-5735_3p |
mirBase accession | None |
Sequence |
38- UGGACAACAAGAUAAAGGCGU -59
Get sequence
|