MirGeneDB 2.1

MirGeneDB ID

Csc-Mir-92-P13

Family name MIR-92 (all species)
Seed AUUGCAC
Species Arizona bark scorpion (Centruroides sculpturatus)
MiRBase ID
Paralogues Csc-Mir-92-P12 
Orthologues Asu-Mir-92  Cel-Mir-92  Esc-Mir-92  Isc-Mir-92  Obi-Mir-92  Sme-Mir-92  Spu-Mir-92-o13 
Node of Origin (locus) C. sculpturatus
Node of Origin (family) Bilateria
Genome context
(GCF_000671375.1_CSC)
NW_019384629.1: 792402-792459 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
AAUUAUUAAUUAGUUUAAUUAACCCUGGCCAGGUCCGGAUGGGCGACAAUAUUGUGUAGCGAACAAUAUUGCACUCGUCCCGGCCUAUCUUGGGCUAUCAUUGCUUCAAAUUCAUGCA
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Structure
        10        20          30        40        50         
AAUUAUUAAUUAGUUUAAUUAA--|  U  CC     C       CGA       GUGUA 
                        CCC GG  AGGUC GGAUGGG   CAAUAUU     \
                        GGG UC  UCCGG CCUGCUC   GUUAUAA     G
ACGUACUUAAACUUCGUUACUAUC^  U  UA     C       AC-       CAAGC 
      110       100        90        80         70        60
Deep sequencing
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3' NTU Unknown
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
 +
Fe Fe Fe Fe Ma Ma Ma
Star sequence

Csc-Mir-92-P13_5p*

mirBase accessionNone
Sequence
0- AGGUCCGGAUGGGCGACAAUAUU -23
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Mature sequence

Csc-Mir-92-P13_3p

mirBase accessionNone
Sequence
36- UAUUGCACUCGUCCCGGCCUAU -58
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