MirGeneDB 2.1

MirGeneDB ID

Dan-Mir-184

Family name

MIR-184 (all species)

Seed

Species

Fruit fly (Drosophila ananassae)

MiRBase ID

dan-mir-184

Paralogues

Orthologues

Aae-Mir-184 Aca-Mir-184 Ami-Mir-184 Asu-Mir-184 Bfl-Mir-184 Bge-Mir-184 Bla-Mir-184 Bpl-Mir-184 Bta-Mir-184 Cfa-Mir-184 Cgi-Mir-184-P7 Cgi-Mir-184-P8a Cgi-Mir-184-P8b Cgi-Mir-184-P8c Cgi-Mir-184-P8d Cgi-Mir-184-P9 Cgi-Mir-184-P10 Cgi-Mir-184-P11 Cgi-Mir-184-P12 Cgi-Mir-184-P13a Cgi-Mir-184-P13b Cgi-Mir-184-P14 Cgi-Mir-184-P15a1 Cgi-Mir-184-P15a2 Cgi-Mir-184-P15a3 Cgi-Mir-184-P15a4 Cgi-Mir-184-P15a5 Cgi-Mir-184-P15a6 Cgi-Mir-184-P15a7 Cgi-Mir-184-P15b Cgi-Mir-184-P15c Cgi-Mir-184-P15d Cgi-Mir-184-P15e1 Cgi-Mir-184-P15e2 Cgi-Mir-184-P15e3 Cgi-Mir-184-P15f Cgi-Mir-184-P15g1 Cgi-Mir-184-P15g2 Cgi-Mir-184-P15g3 Cgi-Mir-184-P15h Cgi-Mir-184-P15i Cgi-Mir-184-P15j Cgi-Mir-184-P15k Cgi-Mir-184-P15l1 Cgi-Mir-184-P15l2 Cgi-Mir-184-P15m Cgi-Mir-184-P15n Cgi-Mir-184-P15o Cgi-Mir-184-P15p Cgi-Mir-184-P15q Cgi-Mir-184-P15r Cgi-Mir-184-P15s Cgi-Mir-184-P15t Cgi-Mir-184-P15u Cin-Mir-184 Cli-Mir-184 Cmi-Mir-184 Cpi-Mir-184 Cpo-Mir-184 Csc-Mir-184-P24 Csc-Mir-184-P25 Cte-Mir-184-P16 Cte-Mir-184-P17 Dma-Mir-184 Dme-Mir-184 Dmo-Mir-184 Dno-Mir-184 Dpu-Mir-184 Dre-Mir-184-P1 Dre-Mir-184-P2 Dsi-Mir-184 Dya-Mir-184 Efe-Mir-184-o1 Efe-Mir-184-o2 Efe-Mir-184-o3 Efe-Mir-184-o4 Esc-Mir-184 Ete-Mir-184 Gga-Mir-184 Gja-Mir-184 Gmo-Mir-184-P1 Gmo-Mir-184-P2 Hme-Mir-184 Hsa-Mir-184 Isc-Mir-184 Lan-Mir-184 Lch-Mir-184 Lgi-Mir-184-P5 Lgi-Mir-184-P6 Loc-Mir-184 Lpo-Mir-184-P18 Lpo-Mir-184-P19 Lpo-Mir-184-P20 Lpo-Mir-184-P21 Lpo-Mir-184-P22 Lpo-Mir-184-P23 Mal-Mir-184-P1 Mal-Mir-184-P2 Mdo-Mir-184 Mml-Mir-184 Mmu-Mir-184 Npo-Mir-184 Oan-Mir-184 Obi-Mir-184-P26 Obi-Mir-184-P27 Ocu-Mir-184 Ovu-Mir-184-P26 Ovu-Mir-184-P27 Pbv-Mir-184 Pfl-Mir-184 Pma-Mir-184 Pmi-Mir-184 Rno-Mir-184 Sha-Mir-184 Sko-Mir-184 Sme-Mir-184-P26 Sme-Mir-184-P27 Spt-Mir-184 Spu-Mir-184 Sto-Mir-184 Tca-Mir-184 Tgu-Mir-184 Tni-Mir-184-P1 Tni-Mir-184-P2 Xla-Mir-184-P3 Xla-Mir-184-P4 Xtr-Mir-184

Node of Origin (locus)

Bilateria

Node of Origin (family)

Bilateria

Genome context
(Dana_caf1)

scaffold_13266: 16524598-16524658 [-] Ensembl

Precursor
(pre-Mir +30nt flank)

UGCCGGCGAGUCCGGCCGGUGCAUUCGUACCCUUAUCAUUCUCGCGCCCCGUGUGCAUAAUGAGACAACUGGACGGAGAACUGAUAAGGGCUCGUAUCACCAAUUCAUCAGGUUGUCCAUC

Get precursor sequence

Structure

        10           20        30         40        50          
UGCCGGCGAGUCCGGCC---|   C  U  UA         -     G  C  C  GUGCAUA 
                    GGUG AU CG  CCCUUAUCA UUCUC CG CC GU       \
                    CCAC UA GC  GGGAAUAGU AAGAG GC GG CA       A
CUACCUGUUGGACUACUUAA^   -  U  UC         C     -  A  U  ACAGAGU 
 .       110       100         90        80         70

Deep sequencing

Go to detailed chart

3' NTU

No

Motifs

UGUG in loop

Tissue expression

-

+

Da

Star sequence

Dan-Mir-184_5p*

mirBase accession

Sequence

0- CCUUAUCAUUCUCGCGCCCCGU -22

Get sequence

Mature sequence

Dan-Mir-184_3p

mirBase accession

Sequence

39- UGGACGGAGAACUGAUAAGGGC -61

Get sequence