MirGeneDB ID | Dmo-Mir-276-P2 |
Family name |
MIR-276 (all species) |
Seed |
GCGAGGU |
Species |
Fruit fly (Drosophila mojavensis) |
MiRBase ID |
dmo-mir-276a
|
Paralogues |
Dmo-Mir-276-P1
|
Orthologues |
Aae-Mir-276-P2
Bge-Mir-276
Dan-Mir-276-P2
Dma-Mir-276
Dme-Mir-276-P2
Dpu-Mir-276
Dsi-Mir-276-P2
Dya-Mir-276-P2
Hme-Mir-276
Isc-Mir-276
Tca-Mir-276
|
Node of Origin (locus) |
Diptera
|
Node of Origin (family) |
Arthropoda
|
Genome context (Dmoj_caf1) |
scaffold_6680: 20621851-20621911 [-]
Ensembl
|
Precursor (pre-Mir +30nt flank) |
UCCAAAGUAUGCUACCUGGUUUUUGCCAUCAGCGAGGUAUAGAGUUCCUACGUUCAAUUUAAAUACUCGUAGGAACUUCAUACCGUGCUCUUGGAAGACCAAAACACAACUCAAACAAAAA
Get precursor sequence
|
Structure | 10 20 30 40 50
UCCAAAGUAUGCUACCU----| UG UC A AG UUCAAUU
GGUUUU CCA AGCG GGUAU AGUUCCUACG \
CCAGAA GGU UCGU CCAUA UCAAGGAUGC U
AAAAACAAACUCAACACAAAA^ -- UC G CU UCAUAAA
. 110 100 90 80 70 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | UG at 5p(-14), CNNC at 3p(+17) |
Tissue expression
|
|
Mature sequence |
Dmo-Mir-276-P2_5p |
mirBase accession | None |
Sequence |
0- AGCGAGGUAUAGAGUUCCUACG -22
Get sequence
|
Co-mature sequence |
Dmo-Mir-276-P2_3p |
mirBase accession | MIMAT0008654 |
Sequence |
39- UAGGAACUUCAUACCGUGCUCU -61
Get sequence
|