MirGeneDB ID | Dmo-Mir-970 |
Family name |
MIR-970 (all species) |
Seed |
CAUAAGA |
Species |
Fruit fly (Drosophila mojavensis) |
MiRBase ID |
|
Paralogues |
|
Orthologues |
Aae-Mir-970
Dan-Mir-970
Dme-Mir-970
Dsi-Mir-970
Dya-Mir-970
Hme-Mir-970
Tca-Mir-970
|
Node of Origin (locus) |
Endopterygota
|
Node of Origin (family) |
Endopterygota
|
Genome context (Dmoj_caf1) |
scaffold_6328: 940009-940073 [-]
Ensembl
|
Precursor (pre-Mir +30nt flank) |
UCGACUAUGAAAACAAUUGACGUCUGUUGUAGCCAGCGGAUGUUUUAUUUGGUAGUUGUAUUUUAUAAAGUCUAUCAUAAGACACACGCGGCUAUAACAGAACUGUUCAAUAAGCAACCUAACCC
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|
Structure | 10 20 30 40 50 60
UCGACUAUGAAAACAAUU --| A GA UU GUUGUAUU
GACG UCUGUUGUAGCC GCG UGUUUUA UGGUA U
UUGU AGACAAUAUCGG CGC ACAGAAU ACUAU U
CCCAAUCCAACGAAUAAC CA^ - AC -- CUGAAAUA
120 110 100 90 80 70 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | No |
Tissue expression
|
|
Star sequence |
Dmo-Mir-970_5p* |
mirBase accession | None |
Sequence |
0- AGCCAGCGGAUGUUUUAUUUGGUA -24
Get sequence
|
Mature sequence |
Dmo-Mir-970_3p |
mirBase accession | None |
Sequence |
44- UCAUAAGACACACGCGGCUAU -65
Get sequence
|