MirGeneDB 2.1

MirGeneDB ID

Dmo-Novel-13

Family name DMO-NOVEL-13 (all species)
Seed AUGAAAC
Species Fruit fly (Drosophila mojavensis)
MiRBase ID
Paralogues
Orthologues
Node of Origin (locus) D. mojavensis
Node of Origin (family) D. mojavensis
Genome context
(Dmoj_caf1)
scaffold_6473: 1018016-1018077 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
UAUGAACUCAUCAUCCAGUGAAUCAAUCUUAAUGAAACUUGGCAUAGAUGCUGCUAAUUGCUGCAGUCAGCAUAUAUGUUGAAGUUGGUUGGAUCGUAUCACUAUAUCAUCAGUUUAAUAAG
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Structure
        10           20        30        40        50        60
UAUGAACUCAUCAUCCA---|   AUCA    U   G  AC UG     G      CUAAUU 
                    GUGA    AUCU AAU AA  U  GCAUA AUGCUG      G
                    CACU    UAGG UUG UU  A  UGUAU UACGAC      C
GAAUAAUUUGACUACUAUAU^   AUGC    -   G  GA GU     A      UGACGU 
120       110       100         90        80        70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
Em Fe Ma Ma
Mature sequence

Dmo-Novel-13_5p

mirBase accessionNone
Sequence
0- AAUGAAACUUGGCAUAGAUGCUGC -24
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Star sequence

Dmo-Novel-13_3p*

mirBase accessionNone
Sequence
39- GCAUAUAUGUUGAAGUUGGUUGG -62
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