MirGeneDB ID | Dno-Mir-12085 |
Family name |
MIR-12085 (all species) |
Seed |
UUGUUUG |
Species |
Nine-banded armadillo (Dasypus novemcinctus) |
MiRBase ID |
dno-mir-12085
|
Paralogues |
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Orthologues |
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Node of Origin (locus) |
D. novemcinctus
|
Node of Origin (family) |
D. novemcinctus
|
Genome context (dasNov3) |
JH570473: 8934016-8934073 [+]
UCSC
Ensembl
|
Precursor (pre-Mir +30nt flank) |
AUUCACGAAUCUCUGUAUCUGAAUGAGGCUUCCGGCAGACAGGCAACCACAGCAGUACGGCCCUGCUUUGUUUGCUGUGUGUCGGAGUCCUCAUCCAGGACUCCUCGACCUGGCAGCC
Get precursor sequence
|
Structure | 10 20 30 40 50
AUUCACGAAUCUCUGUA--| A C G G C C AGUAC
UCUG AUGAGG UUCCGGCA ACAG CAA CA AGC \
GGAC UACUCC GAGGCUGU UGUC GUU GU UCG G
CCGACGGUCCAGCUCCUCA^ C U G - U U UCCCG
110 100 90 80 70 60 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | CNNC at 3p(+17) |
Tissue expression
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|
Star sequence |
Dno-Mir-12085_5p* |
mirBase accession | MIMAT0048069 |
Sequence |
0- UCCGGCAGACAGGCAACCACAGC -23
Get sequence
|
Mature sequence |
Dno-Mir-12085_3p |
mirBase accession | MIMAT0048070 |
Sequence |
36- UUUGUUUGCUGUGUGUCGGAGU -58
Get sequence
|