MirGeneDB 2.1

MirGeneDB ID

Dno-Mir-12085

Family name MIR-12085 (all species)
Seed UUGUUUG
Species Nine-banded armadillo (Dasypus novemcinctus)
MiRBase ID dno-mir-12085
Paralogues
Orthologues
Node of Origin (locus) D. novemcinctus
Node of Origin (family) D. novemcinctus
Genome context
(dasNov3)
JH570473: 8934016-8934073 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AUUCACGAAUCUCUGUAUCUGAAUGAGGCUUCCGGCAGACAGGCAACCACAGCAGUACGGCCCUGCUUUGUUUGCUGUGUGUCGGAGUCCUCAUCCAGGACUCCUCGACCUGGCAGCC
Get precursor sequence
Structure
        10          20        30        40        50         
AUUCACGAAUCUCUGUA--|   A      C        G    G   C  C   AGUAC 
                   UCUG AUGAGG UUCCGGCA ACAG CAA CA AGC     \
                   GGAC UACUCC GAGGCUGU UGUC GUU GU UCG     G
CCGACGGUCCAGCUCCUCA^   C      U        G    -   U  U   UCCCG 
      110       100        90        80         70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
To
Star sequence

Dno-Mir-12085_5p*

mirBase accessionMIMAT0048069
Sequence
0- UCCGGCAGACAGGCAACCACAGC -23
Get sequence
Mature sequence

Dno-Mir-12085_3p

mirBase accessionMIMAT0048070
Sequence
36- UUUGUUUGCUGUGUGUCGGAGU -58
Get sequence