MirGeneDB ID | Dno-Mir-12087 |
Family name |
MIR-12087 (all species) |
Seed |
UAUCUGU |
Species |
Nine-banded armadillo (Dasypus novemcinctus) |
MiRBase ID |
dno-mir-12087
|
Paralogues |
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Orthologues |
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Node of Origin (locus) |
D. novemcinctus
|
Node of Origin (family) |
D. novemcinctus
|
Genome context (dasNov3) |
JH569334: 3472789-3472851 [+]
UCSC
Ensembl
|
Precursor (pre-Mir +30nt flank) |
CGAGUGGCUCAUUAGAGCCUCUGUCUCUAUAAGCAGCAUCAGGCAGAUAACUUGAUCUAAAGACUAUUUAUUUAUCUGUCCAAGGCUGCAAAUGGAGACAGAGGGAGCACCACUGAUGGAAUC
Get precursor sequence
|
Structure | 10 20 30 40 50 60
CGAGUGGCUCAUUAGAG--| AA AUCA CUUGAUCUAA
CCUCUGUCUCUAU GCAGC GGCAGAUAA \
GGAGACAGAGGUA CGUCG CUGUCUAUU A
CUAAGGUAGUCACCACGAG^ AA GAAC UAUUUAUCAG
120 110 100 90 80 70 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | CNNC at 3p(+17) |
Tissue expression
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|
Star sequence |
Dno-Mir-12087_5p* |
mirBase accession | MIMAT0048073 |
Sequence |
0- AAGCAGCAUCAGGCAGAUAACU -22
Get sequence
|
Mature sequence |
Dno-Mir-12087_3p |
mirBase accession | MIMAT0048074 |
Sequence |
41- UUAUCUGUCCAAGGCUGCAAAU -63
Get sequence
|