MirGeneDB ID | Dno-Mir-186 |
Family name |
MIR-186 (all species) |
Seed |
AAAGAAU |
Species |
Nine-banded armadillo (Dasypus novemcinctus) |
MiRBase ID |
dno-mir-186
|
Paralogues |
|
Orthologues |
Bta-Mir-186
Cfa-Mir-186
Cpo-Mir-186
Ete-Mir-186
Hsa-Mir-186
Mdo-Mir-186
Mml-Mir-186
Mmu-Mir-186
Oan-Mir-186
Ocu-Mir-186
Rno-Mir-186
Sha-Mir-186
|
Node of Origin (locus) |
Mammalia
|
Node of Origin (family) |
Mammalia
|
Genome context (dasNov3) |
JH582969: 8099703-8099763 [-]
UCSC
Ensembl
|
Precursor (pre-Mir +30nt flank) |
CCCAAACAAUUUUUCAUUGCUUGUACUUUCCAAAGAAUUCUCCUUUUGGGCUUUCUGAUUUUAUUUUAAGCCCAAAGGUGAAUUUUUUGGGAAGUUUGAGCUAAAUUCCUUCAACCAAAAU
Get precursor sequence
|
Structure | 10 20 30 40 50 60
CCCAAACAAUUUUUCAUU--| U U U UCUGAU
GCUUG ACUUUCCAAAGAAUUC CCUUU GGGCUU U
CGAGU UGAAGGGUUUUUUAAG GGAAA CCCGAA U
UAAAACCAACUUCCUUAAAU^ U U - UUUUAU
. 110 100 90 80 70 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | CNNC at 3p(+17) |
Tissue expression
|
|
Mature sequence |
Dno-Mir-186_5p |
mirBase accession | MIMAT0047707 |
Sequence |
0- CAAAGAAUUCUCCUUUUGGGCUU -23
Get sequence
|
Star sequence |
Dno-Mir-186_3p* |
mirBase accession | MIMAT0047708 |
Sequence |
39- GCCCAAAGGUGAAUUUUUUGGG -61
Get sequence
|