MirGeneDB 2.1

MirGeneDB ID

Dno-Mir-192-P1

Family name MIR-192 (all species)
Seed UGACCUA
Species Nine-banded armadillo (Dasypus novemcinctus)
MiRBase ID dno-mir-215
Paralogues Dno-Mir-192-P2 
Orthologues Aca-Mir-192-P1  Ami-Mir-192-P1  Bta-Mir-192-P1  Cfa-Mir-192-P1  Cli-Mir-192-P1  Cmi-Mir-192-P1  Cpi-Mir-192-P1  Cpo-Mir-192-P1  Ebu-Mir-192-o1  Ete-Mir-192-P1  Gga-Mir-192-P1  Gja-Mir-192-P1  Hsa-Mir-192-P1  Lch-Mir-192-P1  Mdo-Mir-192-P1  Mml-Mir-192-P1  Mmu-Mir-192-P1  Mun-Mir-192-P1  Oan-Mir-192-P1  Oan-Mir-192-P1-as  Ocu-Mir-192-P1  Pbv-Mir-192-P1  Pma-Mir-192-o1  Rno-Mir-192-P1  Spt-Mir-192-P1  Sto-Mir-192-P1  Tgu-Mir-192-P1  Xla-Mir-192-P1a  Xla-Mir-192-P1b  Xtr-Mir-192-P1 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(dasNov3)
JH579496: 2455274-2455333 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AGCCAUCAUUAAGAAAUGGUGUACAGGAAAAUGACCUAUGAAUUGACAGACAAUAUAACUAAGUUUGUCUGUCAUUUCUGUAGGCCAAUUUUCUGUAUGUCUCUGCUCCUUCAAAAUCAG
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Structure
        10          20        30         40        50         
AGCCAUCAUUAAGAAAU-- GU          A  A     -|  U         AUAUAA 
                   G  GUACAGGAAA UG CCUAU GAA UGACAGACA      \
                   C  UAUGUCUUUU AC GGAUG CUU ACUGUCUGU      C
GACUAAAACUUCCUCGUCU UG          A  C     U^  U         UUGAAU 
.       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
 +
To
Mature sequence

Dno-Mir-192-P1_5p

mirBase accessionMIMAT0047760
Sequence
0- AUGACCUAUGAAUUGACAGACA -22
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Star sequence

Dno-Mir-192-P1_3p*

mirBase accessionMIMAT0047761
Sequence
37- UCUGUCAUUUCUGUAGGCCAAUU -60
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