MirGeneDB ID | Dno-Mir-2483 |
Family name |
MIR-2483 (all species) |
Seed |
AUCAAUC |
Species |
Nine-banded armadillo (Dasypus novemcinctus) |
MiRBase ID |
dno-mir-2483
|
Paralogues |
|
Orthologues |
Bta-Mir-2483
Cfa-Mir-2483
Ete-Mir-2483
|
Node of Origin (locus) |
Eutheria
|
Node of Origin (family) |
Eutheria
|
Genome context (dasNov3) |
JH561779: 237389-237444 [-]
UCSC
Ensembl
|
Precursor (pre-Mir +30nt flank) |
GUGACACCCAGAUAUGUGAGUGAAAAUUUCCAUCAAUCAUUCAGCUGUUUGGGGUGAUGCAAACAAACAUCUGGUUGGUUGAGAGAAUUUUUCACUUAGUGUCAGGUUUAAAAACU
Get precursor sequence
|
Structure | 10 20 30 40 50
GUGACACCCAGAUAUGU--| U CA UU C GGGUG
GAGUGAAAA UUC UCAAUCA CAG UGUUUG A
UUCACUUUU AAG AGUUGGU GUC ACAAAC U
UCAAAAAUUUGGACUGUGA^ U AG UG U AAACG
110 100 90 80 70 60 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
Unknown
|
Motifs | UG at 5p(-14) |
Tissue expression
|
|
Mature sequence |
Dno-Mir-2483_5p |
mirBase accession | MIMAT0048057 |
Sequence |
0- CAUCAAUCAUUCAGCUGUUUGG -22
Get sequence
|
Star sequence |
Dno-Mir-2483_3p* (predicted) |
mirBase accession | MIMAT0048058 |
Sequence |
34- AAACAUCUGGUUGGUUGAGAGA -56
Get sequence
|