MirGeneDB 2.1

MirGeneDB ID

Dno-Mir-378

Family name MIR-378 (all species)
Seed CUGGACU
Species Nine-banded armadillo (Dasypus novemcinctus)
MiRBase ID dno-mir-378
Paralogues
Orthologues Bta-Mir-378  Cfa-Mir-378  Cpo-Mir-378  Ete-Mir-378  Hsa-Mir-378  Mml-Mir-378  Mmu-Mir-378  Ocu-Mir-378  Rno-Mir-378 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(dasNov3)
JH565448: 58825-58884 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GCAGCCAGCGGGUGACAGAGCCACCCAGGGCUCCUGACUCCAGGUCCUGUGUGUUACCUUGAAAUAGCACUGGACUUGGAGUCAGAAGGCCUGAGUGGAGUCGCCUUCCCCACUCUCUGG
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Structure
        10         20         30        40        50         
GCAGCCAGCGGGUGACA-  G-|   C    G  C              U    GUUACC 
                  GA  CCAC CAGG CU CUGACUCCAGGUCC GUGU      U
                  CU  GGUG GUCC GA GACUGAGGUUCAGG CACG      U
GGUCUCUCACCCCUUCCG  GA^   A    G  A              U    AUAAAG 
.       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
To
Star sequence

Dno-Mir-378_5p*

mirBase accessionMIMAT0047858
Sequence
0- CUCCUGACUCCAGGUCCUGUGU -22
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Mature sequence

Dno-Mir-378_3p

mirBase accessionMIMAT0047859
Sequence
38- ACUGGACUUGGAGUCAGAAGGC -60
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