MirGeneDB ID | Dno-Mir-459 |
Family name |
MIR-459 (all species) |
Seed |
CAGUAAC |
Species |
Nine-banded armadillo (Dasypus novemcinctus) |
MiRBase ID |
dno-mir-802
|
Paralogues |
|
Orthologues |
Ami-Mir-459
Bta-Mir-459
Cfa-Mir-459
Cli-Mir-459
Cpi-Mir-459
Cpo-Mir-459
Dre-Mir-459
Ebu-Mir-459
Ete-Mir-459
Gmo-Mir-459
Hsa-Mir-459
Loc-Mir-459
Mal-Mir-459
Mml-Mir-459
Mmu-Mir-459
Mun-Mir-459
Oan-Mir-459
Ocu-Mir-459
Pma-Mir-459
Rno-Mir-459
Spt-Mir-459
Sto-Mir-459
Tni-Mir-459
Xla-Mir-459-P1
Xla-Mir-459-P2
Xtr-Mir-459
|
Node of Origin (locus) |
Vertebrata
|
Node of Origin (family) |
Vertebrata
|
Genome context (dasNov3) |
JH573390: 2215448-2215508 [+]
UCSC
Ensembl
|
Precursor (pre-Mir +30nt flank) |
UGCUUGCCACCAGACUUCUAUUAUUUGCAUUCAGUAACAAAGUUUCAUCCUUGUGUCCAUCAAGCAACAAGGAGAAUCUUUGUCACUUGGUGUAAUUAAUAGCUGCACCUCGCAUGGAGUG
Get precursor sequence
|
Structure | 10 20 30 40 50 60
UGCUUGCCACCAGACUU--| U UC A U A GUCCA
CUAUUA UUGCAU AGU ACAAAG UUC UCCUUGU U
GAUAAU AAUGUG UCA UGUUUC AAG AGGAACA C
GUGAGGUACGCUCCACGUC^ U GU C U - ACGAA
. 110 100 90 80 70 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | CNNC at 3p(+17) |
Tissue expression
|
|
Mature sequence |
Dno-Mir-459_5p |
mirBase accession | MIMAT0048014 |
Sequence |
0- UCAGUAACAAAGUUUCAUCCUUGU -24
Get sequence
|
Co-mature sequence |
Dno-Mir-459_3p |
mirBase accession | MIMAT0048015 |
Sequence |
38- AAGGAGAAUCUUUGUCACUUGGU -61
Get sequence
|