MirGeneDB 2.1

MirGeneDB ID

Dno-Mir-506-P7i

Family name MIR-506 (all species)
Seed UUGACAC
Species Nine-banded armadillo (Dasypus novemcinctus)
MiRBase ID
Paralogues Dno-Mir-506-P1  Dno-Mir-506-P2  Dno-Mir-506-P3  Dno-Mir-506-P7f  Dno-Mir-506-P7g  Dno-Mir-506-P7h 
Orthologues Cfa-Mir-506-P7  Mmu-Mir-506-P7  Rno-Mir-506-P7 
Node of Origin (locus) D. novemcinctus
Node of Origin (family) Eutheria
Genome context
(dasNov3)
JH564535: 672065-672122 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-506-P7i)
Mir-506-P2 JH564535: 655807-655864 [+] UCSC Ensembl
Mir-506-P3 JH564535: 697744-697800 [+] UCSC Ensembl
Mir-506-P7f JH564535: 715717-715774 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CGAUCUUCAAGCAUACUGUGUGUGGUACCCUACUCCAGAGAGUGACAAUCACGUAUAAGUAAAUAUGAUUGACACCUCUGAGAGUGGAGUAAUGCAUGACAUAUACGACAUAUGUGAU
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Structure
        10          20        30         40        50        
CGAUCUUCAAGCAUACU-  -    GG   C      -|    A   A      CGUAUA 
                  GU GUGU  UAC CUACUC CAGAG GUG CAAUCA      A
                  CA UACG  AUG GGUGAG GUCUC CAC GUUAGU      G
UAGUGUAUACAGCAUAUA  G    UA   A      A^    -   A      AUAAAU 
      110       100        90        80         70        60
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
 +
To
Star sequence

Dno-Mir-506-P7i_5p* (predicted)

mirBase accessionNone
Sequence
0- UACUCCAGAGAGUGACAAUCA -21
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Mature sequence

Dno-Mir-506-P7i_3p

mirBase accessionNone
Sequence
37- AUUGACACCUCUGAGAGUGGA -58
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