MirGeneDB 2.1

MirGeneDB ID

Dno-Mir-551-P2

Family name MIR-551 (all species)
Seed CGACCCA
Species Nine-banded armadillo (Dasypus novemcinctus)
MiRBase ID dno-mir-551b
Paralogues
Orthologues Aca-Mir-551-P2  Ami-Mir-551-P2  Bta-Mir-551-P2  Cfa-Mir-551-P2  Cli-Mir-551-P2  Cmi-Mir-551-P2  Cpi-Mir-551-P2  Cpo-Mir-551-P2  Dre-Mir-551-P2  Ete-Mir-551-P2  Gga-Mir-551-P2  Gja-Mir-551-P2  Gmo-Mir-551-P2  Hsa-Mir-551-P2  Lch-Mir-551-P2  Loc-Mir-551-P2  Mal-Mir-551-P2  Mdo-Mir-551-P2  Mml-Mir-551-P2  Mmu-Mir-551-P2  Mun-Mir-551-P2  Oan-Mir-551-P2  Ocu-Mir-551-P2  Pbv-Mir-551-P2  Rno-Mir-551-P2  Sha-Mir-551-P2  Spt-Mir-551-P2  Sto-Mir-551-P2  Tgu-Mir-551-P2  Xla-Mir-551-P2a  Xla-Mir-551-P2b  Xtr-Mir-551-P2 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(dasNov3)
JH562293: 2847168-2847227 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UGCCUCUGCCCAAUGUGUCCCGUGGCCCGUGAAAUCAAGCGUGGGUGAGACCUGGUGCAGAACGGGAAGGCGACCCAUACUUGGUUUCAGAGGCUGCGAGAAUACCUACAGUUAUGAGGG
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Structure
        10          20        30        40        50        60
UGCCUCUGCCCAAUGUG--| C  UG   CG          CG     GAGA   GGUGCA 
                   UC CG  GCC  UGAAAUCAAG  UGGGU    CCU      G
                   AG GC  CGG  ACUUUGGUUC  ACCCA    GGA      A
GGGAGUAUUGACAUCCAUA^ A  GU   AG          AU     GC--   AGGGCA 
.       110       100        90        80          70
Deep sequencing
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3' NTU Yes
MotifsCNNC at 3p(+17)
Tissue expression
 +
To
Star sequence

Dno-Mir-551-P2_5p*

mirBase accessionMIMAT0047976
Sequence
0- GAAAUCAAGCGUGGGUGAGACCU -23
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Mature sequence

Dno-Mir-551-P2_3p

mirBase accessionMIMAT0047977
Sequence
39- GCGACCCAUACUUGGUUUCAG -60
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