| MirGeneDB ID | Dno-Mir-592 |
|---|
| Family name |
MIR-592 (all species) |
|---|
| Seed |
UGUGUCA |
|---|
| Species |
Nine-banded armadillo (Dasypus novemcinctus) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
|
|---|
| Orthologues |
Bta-Mir-592
Cfa-Mir-592
Cpo-Mir-592
Ete-Mir-592
Hsa-Mir-592
Mml-Mir-592
Mmu-Mir-592
Ocu-Mir-592
Rno-Mir-592
|
|---|
| Node of Origin (locus) |
Eutheria
|
|---|
| Node of Origin (family) |
Eutheria
|
|---|
Genome context
(dasNov3) |
JH570472: 1253795-1253855 [+]
UCSC
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
AAUUUAAUUUGAUGAUAUUAUGCCAUGGCAUUGUGUCAAUAUGCGAUGAUGUGUUGUGAUGGCACAGCGUCAUCACGUGGUGACGCAACAUCAUGACGUAAAACAUCACAACGCCCAUUAA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
AAUUUAAUUUGAUGAUA---| C CA A C GUUGUG
UUAUG CAUGG UUGUGUCA UAUG GAUGAUGU A
AAUGC GUACU AACGCAGU GUGC CUACUGCG U
AAUUACCCGCAACACUACAA^ A AC G A ACACGG
. 110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| Comment | Mir-592 was classified in Fromm et al. (2015) as a non-canonical miRNA as the Dicer cut is always +3 but given the conservation of the sequence and that it is clearly processed by Drosha it is accepted here as a bona fide miRNA. |
|---|
| 3' NTU |
Unknown
|
|---|
| Motifs | CNNC at 3p(+17) |
|---|
Tissue expression
|
|
|---|
| Mature sequence |
Dno-Mir-592_5p |
| mirBase accession | None |
|---|
| Sequence |
0- UUGUGUCAAUAUGCGAUGAUGU -22
Get sequence
|
|---|
| Star sequence |
Dno-Mir-592_3p* (predicted) |
| mirBase accession | None |
|---|
| Sequence |
39- UCAUCACGUGGUGACGCAACAU -61
Get sequence
|
|---|
