MirGeneDB ID | Dno-Mir-652 |
Family name |
MIR-652 (all species) |
Seed |
AUGGCGC |
Species |
Nine-banded armadillo (Dasypus novemcinctus) |
MiRBase ID |
dno-mir-652
|
Paralogues |
|
Orthologues |
Bta-Mir-652
Cfa-Mir-652
Cpo-Mir-652
Ete-Mir-652
Hsa-Mir-652
Mml-Mir-652
Mmu-Mir-652
Ocu-Mir-652
Rno-Mir-652
|
Node of Origin (locus) |
Eutheria
|
Node of Origin (family) |
Eutheria
|
Genome context (dasNov3) |
JH570527: 180684-180744 [+]
UCSC
Ensembl
|
Precursor (pre-Mir +30nt flank) |
CCGGGCUGCCACGAAUGGCUAUGCACUGUACAACCCUAGGAGAGGAUGCCAUUCACAUAGACUAUAAUUGAAUGGCGCCACUAGGGUUGUGCAGGGCACAACCUAUACAACUGUACUCGGU
Get precursor sequence
|
Structure | 10 20 30 40 50 60
CCGGGCUGCCACGAAUGGCUA--| A GAGA A CAUAGA
UGC CUGUACAACCCUAG GG UGCCAUUCA \
ACG GACGUGUUGGGAUC CC GCGGUAAGU C
UGGCUCAUGUCAACAUAUCCAAC^ G A--- - UAAUAU
. 110 100 90 80 70 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
Yes
|
Motifs | CNNC at 3p(+17) |
Tissue expression
|
|
Star sequence |
Dno-Mir-652_5p* |
mirBase accession | MIMAT0047986 |
Sequence |
0- CAACCCUAGGAGAGGAUGCCAUUCA -25
Get sequence
|
Mature sequence |
Dno-Mir-652_3p |
mirBase accession | MIMAT0047987 |
Sequence |
40- AAUGGCGCCACUAGGGUUGUG -61
Get sequence
|