MirGeneDB 2.1

MirGeneDB ID

Dno-Mir-652

Family name MIR-652 (all species)
Seed AUGGCGC
Species Nine-banded armadillo (Dasypus novemcinctus)
MiRBase ID dno-mir-652
Paralogues
Orthologues Bta-Mir-652  Cfa-Mir-652  Cpo-Mir-652  Ete-Mir-652  Hsa-Mir-652  Mml-Mir-652  Mmu-Mir-652  Ocu-Mir-652  Rno-Mir-652 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(dasNov3)
JH570527: 180684-180744 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CCGGGCUGCCACGAAUGGCUAUGCACUGUACAACCCUAGGAGAGGAUGCCAUUCACAUAGACUAUAAUUGAAUGGCGCCACUAGGGUUGUGCAGGGCACAACCUAUACAACUGUACUCGGU
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Structure
        10        20          30        40        50        60  
CCGGGCUGCCACGAAUGGCUA--|  A              GAGA  A         CAUAGA 
                       UGC CUGUACAACCCUAG    GG UGCCAUUCA      \
                       ACG GACGUGUUGGGAUC    CC GCGGUAAGU      C
UGGCUCAUGUCAACAUAUCCAAC^  G              A---  -         UAAUAU 
 .       110       100        90        80            70
Deep sequencing
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3' NTU Yes
MotifsCNNC at 3p(+17)
Tissue expression
 +
To
Star sequence

Dno-Mir-652_5p*

mirBase accessionMIMAT0047986
Sequence
0- CAACCCUAGGAGAGGAUGCCAUUCA -25
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Mature sequence

Dno-Mir-652_3p

mirBase accessionMIMAT0047987
Sequence
40- AAUGGCGCCACUAGGGUUGUG -61
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