MirGeneDB ID | Dno-Mir-6529 |
Family name |
MIR-6529 (all species) |
Seed |
AGAGAUC |
Species |
Nine-banded armadillo (Dasypus novemcinctus) |
MiRBase ID |
dno-mir-6529
|
Paralogues |
|
Orthologues |
Bta-Mir-6529
Cfa-Mir-6529
Cpo-Mir-6529
Ete-Mir-6529
Hsa-Mir-6529
Mml-Mir-6529
Ocu-Mir-6529
|
Node of Origin (locus) |
Eutheria
|
Node of Origin (family) |
Eutheria
|
Genome context (dasNov3) |
JH579988: 1963445-1963505 [+]
UCSC
Ensembl
|
Precursor (pre-Mir +30nt flank) |
AACAUCUUAGAUGAGAAAACCUGUUCUCUUGAGAGAUCAGAGGCGCAGAGUGCGUCAAUGUCAGUGAAGCCUGUGCCUUUUACCUCUUUAAGAGCGCAAGGUUUCAUCCUGCUCCUAAACU
Get precursor sequence
|
Structure | 10 20 30 40 50
AACAUCUUAGAUGAGAA- - U -| AUC A GCGUCAAU
AACC UGU CUCUU GAGAG AGAGGCGCAG GU \
UUGG ACG GAGAA UUCUC UUUCCGUGUC CG G
UCAAAUCCUCGUCCUACU A C U^ CAU - AAGUGACU
. 110 100 90 80 70 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | CNNC at 3p(+17) |
Tissue expression
|
|
Mature sequence |
Dno-Mir-6529_5p |
mirBase accession | MIMAT0048067 |
Sequence |
0- GAGAGAUCAGAGGCGCAGAGU -21
Get sequence
|
Star sequence |
Dno-Mir-6529_3p* |
mirBase accession | MIMAT0048068 |
Sequence |
39- CCUGUGCCUUUUACCUCUUUAA -61
Get sequence
|