MirGeneDB 2.1

MirGeneDB ID

Dya-Mir-1003

Family name MIR-1003 (all species)
Seed CUCACAU
Species Fruit fly (Drosophila yakuba)
MiRBase ID
Paralogues
Orthologues Dan-Mir-1003  Dme-Mir-1003  Dmo-Mir-1003  Dsi-Mir-1003 
Node of Origin (locus) Drosophila
Node of Origin (family) Drosophila
Genome context
(Drosophila_yakuba.dyak_caf1.dna.toplevel)
3R: 26013217-26013272 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GCGUGAACUGGCUCUGAAGCUGCGCAGAAGGUGGGUAUCUGGAUGUGGUUGGCUCUGGCGGUCCUCUCACAUUUACAUAUUCACAGGCGUCGUGAGCUGCGACACAAAUAUGGAAC
Get precursor sequence
Structure
        10         20            30        40        50       
GCGUGAACUGGCUCUGA-    ----|   AGAAG        C         UU  CUCU 
                  AGCU    GCGC     GUGGGUAU UGGAUGUGG  GG    G
                  UCGA    UGCG     CACUUAUA AUUUACACU  CC    G
CAAGGUAUAAACACAGCG    GUGC^   GA---        C         CU  UGGC 
    110       100        90           80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsNo
Tissue expression
 +
He Wh
Star sequence

Dya-Mir-1003_5p*

mirBase accessionNone
Sequence
0- GUGGGUAUCUGGAUGUGGUUGG -22
Get sequence
Mature sequence

Dya-Mir-1003_3p

mirBase accessionNone
Sequence
34- UCUCACAUUUACAUAUUCACAG -56
Get sequence