MirGeneDB ID | Dya-Mir-1007 |
Family name |
MIR-1007 (all species) |
Seed |
AAGCUCA |
Species |
Fruit fly (Drosophila yakuba) |
MiRBase ID |
|
Paralogues |
|
Orthologues |
Dan-Mir-1007
Dme-Mir-1007
Dsi-Mir-1007
|
Node of Origin (locus) |
D. melanogaster group
|
Node of Origin (family) |
D. melanogaster group
|
Genome context (Drosophila_yakuba.dyak_caf1.dna.toplevel) |
X: 20343136-20343200 [-]
UCSC
Ensembl
|
Precursor (pre-Mir +30nt flank) |
GUGGCGAGGAUGACAACGAAUCUGUUCAGUGUAAGCAGUGUUUGAACUCGAUCUAGGAUCUUGGACUCUUGAUAAGCUCAAUUAACUGUUUGCAGCGGACGGCAUCUUCUCGGAGAAUCGACGAC
Get precursor sequence
|
Structure | 10 20 30 40 50 60
GUGGCGAGGAUGACAAC-- AU AG GU-| A CG UAGGAUCU
GA CUGUUC UGUAAGCAGU UUGA CU AUC \
CU GGCAGG ACGUUUGUCA AACU GA UAG U
CAGCAGCUAAGAGGCUCUU AC CG AUU^ C A- UUCUCAGG
120 110 100 90 80 70 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
Yes
|
Motifs | No |
Tissue expression
|
|
Star sequence |
Dya-Mir-1007_5p* |
mirBase accession | None |
Sequence |
0- GUAAGCAGUGUUUGAACUCGAUC -23
Get sequence
|
Mature sequence |
Dya-Mir-1007_3p |
mirBase accession | None |
Sequence |
42- UAAGCUCAAUUAACUGUUUGCAG -65
Get sequence
|