MirGeneDB ID | Dya-Mir-966 |
Family name |
MIR-966 (all species) |
Seed |
GUGGGAU |
Species |
Fruit fly (Drosophila yakuba) |
MiRBase ID |
|
Paralogues |
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Orthologues |
Dme-Mir-966
Dsi-Mir-966
|
Node of Origin (locus) |
D. melanogaster subgroup
|
Node of Origin (family) |
D. melanogaster subgroup
|
Genome context (Drosophila_yakuba.dyak_caf1.dna.toplevel) |
2L: 13146739-13146794 [+]
UCSC
Ensembl
|
Precursor (pre-Mir +30nt flank) |
AUUCCGCUCGGCUGUAACCUGAUCCGCUGCUGUGGGAUGUGGGAUGUGGGCUGUGGUAUAGGUGCCGCCAGUUGAUAACCCCCAGCGUGGGCACGGCCCCACUGGUCGUCAACCGC
Get precursor sequence
|
Structure | 10 20 30 40 50
AUUCCGCUCGGCUGUAA--- -| A U U A G A UG UGUGG
CC UG UCCGC GCUG GGG UGU GG UG GGC U
GG AC GGGUG CGAC CCC AUA UU AC CCG A
CGCCAACUGCUGGUCACCCC C^ - - C A G G CG UGGAU
110 100 90 80 70 60 |
Deep sequencing |
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3' NTU |
Unknown
|
Motifs | UGUG in loop |
Tissue expression
|
|
Mature sequence |
Dya-Mir-966_5p (predicted) |
mirBase accession | None |
Sequence |
0- UGUGGGAUGUGGGAUGUGGGCU -22
Get sequence
|
Star sequence |
Dya-Mir-966_3p* (predicted) |
mirBase accession | None |
Sequence |
34- CCGCCAGUUGAUAACCCCCAGC -56
Get sequence
|