MirGeneDB ID | Dya-Mir-987 |
Family name |
MIR-987 (all species) |
Seed |
AAAGUAA |
Species |
Fruit fly (Drosophila yakuba) |
MiRBase ID |
|
Paralogues |
|
Orthologues |
Dan-Mir-987
Dme-Mir-987
Dmo-Mir-987
Dsi-Mir-987
|
Node of Origin (locus) |
Drosophila
|
Node of Origin (family) |
Drosophila
|
Genome context (Drosophila_yakuba.dyak_caf1.dna.toplevel) |
2L: 17856082-17856147 [-]
UCSC
Ensembl
|
Precursor (pre-Mir +30nt flank) |
AGCGGAAGACGAACAAUGUUGGACUGUGUUUAAAGUAAAUAGUCUGGAUUGAUGAAAGUUGCAUUCGAGAAUUCAUCAACAGGCAUUUACUUCAACUGCAGUUUGAACGAAAUGCAACAGGAAAGU
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|
Structure | 10 20 30 40 50 60
AGCGGAAGACGAACAAUG--|UG GU A A GA AAGUUGCA
U GACUGU UU AAGUAAAU GUCUG UUGAUGA \
A UUGACG AA UUCAUUUA CGGAC AACUACU U
UGAAAGGACAACGUAAAGCA^GU UC C - -- UAAGAGCU
120 110 100 90 80 70 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | UG at 5p(-14) |
Tissue expression
|
|
Mature sequence |
Dya-Mir-987_5p |
mirBase accession | None |
Sequence |
0- UAAAGUAAAUAGUCUGGAUUGAUGA -25
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|
Star sequence |
Dya-Mir-987_3p* |
mirBase accession | None |
Sequence |
44- AUCAACAGGCAUUUACUUCAAC -66
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|