MirGeneDB ID | Ete-Mir-362-P1 |
Family name |
MIR-362 (all species) |
Seed |
AUCCUUG |
Species |
Lesser hedgehog tenrec (Echinops telfairi) |
MiRBase ID |
|
Paralogues |
Ete-Mir-362-P4
|
Orthologues |
Bta-Mir-362-P1
Cfa-Mir-362-P1
Cpo-Mir-362-P1
Dno-Mir-362-P1
Hsa-Mir-362-P1
Mml-Mir-362-P1
Mmu-Mir-362-P1
Ocu-Mir-362-P1
Rno-Mir-362-P1
|
Node of Origin (locus) |
Eutheria
|
Node of Origin (family) |
Eutheria
|
Genome context (echTel2) |
JH980365: 3859828-3859886 [-]
UCSC
|
Precursor (pre-Mir +30nt flank) |
UCUGAGCCUUCUUGUCUGCUCCCCCUCUCUAAUCCUUGGAACCUAGGUGUGAGUGUUGUUUCAAUGCAACACACCUAUUCAAGGAUUCAAAGAGGCUGAGCCUUGUCUUCACGUAGAAG
Get precursor sequence
|
Structure | 10 20 30 40 50
UCUGAGCCUUCUUGUCU- CC CU-| ACC A- GUUGU
GCUC CCUCU AAUCCUUGGA UAGGUGUG GU \
CGAG GGAGA UUAGGAACUU AUCCACAC CG U
GAAGAUGCACUUCUGUUC UC AAC^ --- AA UAACU
110 100 90 80 70 |
Deep sequencing |
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|
3' NTU |
No
|
Motifs | UG at 5p(-14), CNNC at 3p(+17) |
Tissue expression
|
|
Mature sequence |
Ete-Mir-362-P1_5p |
mirBase accession | None |
Sequence |
0- AAUCCUUGGAACCUAGGUGUGAGU -24
Get sequence
|
Co-mature sequence |
Ete-Mir-362-P1_3p |
mirBase accession | None |
Sequence |
37- AACACACCUAUUCAAGGAUUCA -59
Get sequence
|