| MirGeneDB ID | Ete-Mir-574 |
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| Family name |
MIR-574 (all species) |
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| Seed |
GAGUGUG |
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| Species |
Lesser hedgehog tenrec (Echinops telfairi) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
Bta-Mir-574
Cfa-Mir-574
Cpo-Mir-574
Dno-Mir-574
Hsa-Mir-574
Mml-Mir-574
Mmu-Mir-574
Ocu-Mir-574
|
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| Node of Origin (locus) |
Eutheria
|
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| Node of Origin (family) |
Eutheria
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Genome context
(echTel2) |
JH980307: 6776196-6776253 [-]
UCSC
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Precursor
(pre-Mir +30nt flank) |
GGCCGAGGGCCCUGCGUGGGUGCGGGCGUGUGAGUGUGUGUGUGUGAGUGUGUGUCGCUCCGGGUCCACGCUCAUGCACACACCCACACGCCCGCGCUCCGGGUCUGCCCCCUCGGCC
Get precursor sequence
|
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| Structure | 10 20 30 40 50
GGCCGAGGGCCCUGCGU- -| AGU UGUCGC
GG GUGCGGGCGUGUG GUGUGUGUGUGAGUGUG U
CC CGCGCCCGCACAC CACACACGUACUCGCAC C
CCGGCUCCCCCGUCUGGG U^ C-- CUGGGC
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | UG at 5p(-14), CNNC at 3p(+17) |
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Tissue expression
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| Mature sequence |
Ete-Mir-574_5p |
| mirBase accession | None |
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| Sequence |
0- UGAGUGUGUGUGUGUGAGUGUGUG -24
Get sequence
|
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| Co-mature sequence |
Ete-Mir-574_3p |
| mirBase accession | None |
|---|
| Sequence |
36- CACGCUCAUGCACACACCCACA -58
Get sequence
|
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