MirGeneDB 2.1

MirGeneDB ID

Ete-Mir-574

Family name MIR-574 (all species)
Seed GAGUGUG
Species Lesser hedgehog tenrec (Echinops telfairi)
MiRBase ID
Paralogues
Orthologues Bta-Mir-574  Cfa-Mir-574  Cpo-Mir-574  Dno-Mir-574  Hsa-Mir-574  Mml-Mir-574  Mmu-Mir-574  Ocu-Mir-574 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(echTel2)
JH980307: 6776196-6776253 [-] UCSC
Precursor
(pre-Mir +30nt flank)
GGCCGAGGGCCCUGCGUGGGUGCGGGCGUGUGAGUGUGUGUGUGUGAGUGUGUGUCGCUCCGGGUCCACGCUCAUGCACACACCCACACGCCCGCGCUCCGGGUCUGCCCCCUCGGCC
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Structure
        10          20        30        40        50         
GGCCGAGGGCCCUGCGU-  -|            AGU                 UGUCGC 
                  GG GUGCGGGCGUGUG   GUGUGUGUGUGAGUGUG      U
                  CC CGCGCCCGCACAC   CACACACGUACUCGCAC      C
CCGGCUCCCCCGUCUGGG  U^            C--                 CUGGGC 
      110       100        90          80        70        60
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
 +
To
Mature sequence

Ete-Mir-574_5p

mirBase accessionNone
Sequence
0- UGAGUGUGUGUGUGUGAGUGUGUG -24
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Co-mature sequence

Ete-Mir-574_3p

mirBase accessionNone
Sequence
36- CACGCUCAUGCACACACCCACA -58
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