MirGeneDB 2.1

MirGeneDB ID

Ete-Mir-744

Family name MIR-744 (all species)
Seed GCGGGGC
Species Lesser hedgehog tenrec (Echinops telfairi)
MiRBase ID
Paralogues
Orthologues Bta-Mir-744  Cfa-Mir-744  Cpo-Mir-744  Dno-Mir-744  Hsa-Mir-744  Mml-Mir-744  Mmu-Mir-744  Ocu-Mir-744  Rno-Mir-744 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(echTel2)
JH980329: 14510664-14510742 [-] UCSC
Precursor
(pre-Mir +30nt flank)
AGAGGAGGCAGCACACUGGGUUGGGCAAGGUGCGGGGCUAGGGCUAACAGCAGUCUCACUGAAGGUUUCCUGGAAACCGCACACAUGCUGUUGCCACUAACCUCAACCUUACUCGGCCCUGACCGGCUCGGCUUCUGUU
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Structure
        10           20        30        40         50        60         
AGAGGAGGCAGCACACU---|       C     GC    C   -   U       GUCUCACUGAAGGUUU 
                    GGGUUGGG AAGGU  GGGG UAG GGC AACAGCA                \
                    CCCGGCUC UUCCA  CUCC AUC CCG UUGUCGU                C
UUGUCUUCGGCUCGGCCAGU^       A     A-    A   A   -       ACACACGCCAAAGGUC 
       130       120       110        100         90        80        70
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14)
Tissue expression
 +
To
Mature sequence

Ete-Mir-744_5p

mirBase accessionNone
Sequence
0- UGCGGGGCUAGGGCUAACAGCA -22
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Star sequence

Ete-Mir-744_3p*

mirBase accessionNone
Sequence
57- CUGUUGCCACUAACCUCAACCU -79
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