MirGeneDB ID | Ete-Mir-744 |
Family name |
MIR-744 (all species) |
Seed |
GCGGGGC |
Species |
Lesser hedgehog tenrec (Echinops telfairi) |
MiRBase ID |
|
Paralogues |
|
Orthologues |
Bta-Mir-744
Cfa-Mir-744
Cpo-Mir-744
Dno-Mir-744
Hsa-Mir-744
Mml-Mir-744
Mmu-Mir-744
Ocu-Mir-744
Rno-Mir-744
|
Node of Origin (locus) |
Eutheria
|
Node of Origin (family) |
Eutheria
|
Genome context (echTel2) |
JH980329: 14510664-14510742 [-]
UCSC
|
Precursor (pre-Mir +30nt flank) |
AGAGGAGGCAGCACACUGGGUUGGGCAAGGUGCGGGGCUAGGGCUAACAGCAGUCUCACUGAAGGUUUCCUGGAAACCGCACACAUGCUGUUGCCACUAACCUCAACCUUACUCGGCCCUGACCGGCUCGGCUUCUGUU
Get precursor sequence
|
Structure | 10 20 30 40 50 60
AGAGGAGGCAGCACACU---| C GC C - U GUCUCACUGAAGGUUU
GGGUUGGG AAGGU GGGG UAG GGC AACAGCA \
CCCGGCUC UUCCA CUCC AUC CCG UUGUCGU C
UUGUCUUCGGCUCGGCCAGU^ A A- A A - ACACACGCCAAAGGUC
130 120 110 100 90 80 70 |
Deep sequencing |
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|
3' NTU |
No
|
Motifs | UG at 5p(-14) |
Tissue expression
|
|
Mature sequence |
Ete-Mir-744_5p |
mirBase accession | None |
Sequence |
0- UGCGGGGCUAGGGCUAACAGCA -22
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|
Star sequence |
Ete-Mir-744_3p* |
mirBase accession | None |
Sequence |
57- CUGUUGCCACUAACCUCAACCU -79
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|