MirGeneDB ID | Ete-Mir-769 |
Family name |
MIR-769 (all species) |
Seed |
AAGACCU |
Species |
Lesser hedgehog tenrec (Echinops telfairi) |
MiRBase ID |
|
Paralogues |
|
Orthologues |
Bta-Mir-769
Cfa-Mir-769
Cpo-Mir-769
Dno-Mir-769
Hsa-Mir-769
Mml-Mir-769
|
Node of Origin (locus) |
Eutheria
|
Node of Origin (family) |
Eutheria
|
Genome context (echTel2) |
JH980338: 11049700-11049760 [+]
UCSC
|
Precursor (pre-Mir +30nt flank) |
CGACGUGGUGCCUAUUCCUGGGCUCUGACUCAAGACCUCUGGGUUCUGAGCCCUGAUGUGGCUGCCGAGCUGGGAUCUCCGGGGUUUUGGUUCAGGGUCAGGGCCUCUGGGUUCUGAGUAC
Get precursor sequence
|
Structure | 10 20 30 40 50
CGACGUGGUGCCUAUUC--| G CU U U G CCUGAUGU
CU GGCUCUGA CAAGACCUC GGG UCU AGC \
GG CUGGGACU GUUUUGGGG CUC AGG UCG G
CAUGAGUCUUGGGUCUCCG^ A UG C U G AGCCGUCG
. 110 100 90 80 70 |
Deep sequencing |
|
3' NTU |
Unknown
|
Motifs | No |
Tissue expression
|
|
Mature sequence |
Ete-Mir-769_5p (predicted) |
mirBase accession | None |
Sequence |
0- CAAGACCUCUGGGUUCUGAGCC -22
Get sequence
|
Star sequence |
Ete-Mir-769_3p* (predicted) |
mirBase accession | None |
Sequence |
39- CUGGGAUCUCCGGGGUUUUGGU -61
Get sequence
|