MirGeneDB ID | Ete-Mir-9851 |
Family name |
MIR-9851 (all species) |
Seed |
GCCGGCA |
Species |
Lesser hedgehog tenrec (Echinops telfairi) |
MiRBase ID |
|
Paralogues |
|
Orthologues |
Bta-Mir-9851
Cfa-Mir-9851
Hsa-Mir-9851
Mml-Mir-9851
Ocu-Mir-9851
|
Node of Origin (locus) |
Eutheria
|
Node of Origin (family) |
Eutheria
|
Genome context (echTel2) |
JH980301: 12629599-12629655 [+]
UCSC
|
Precursor (pre-Mir +30nt flank) |
CAGCAGUGGCAGCAGAGGCGGUGAGCCCGGCGCCGGCAGUGUUGGUGGCACCUGCGUGGUGGCGGUGGCACCAGUACUGGCGGUGGCGGUGGCACCAGCACUGGCAGCACCUGUUCG
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|
Structure | 10 20 30 40 50
CAGCAGUGGCAGCAGAG- -| AGC G G G UGCGU
GC GGUG CCG CGCCG CAGUGUUGGUG CACC \
CG CCAC GGC GUGGC GUCAUGACCAC GUGG G
GCUUGUCCACGACGGUCA A^ GGU G G G CGGUG
110 100 90 80 70 60 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | CNNC at 3p(+17) |
Tissue expression
|
|
Mature sequence |
Ete-Mir-9851_5p |
mirBase accession | None |
Sequence |
0- CGCCGGCAGUGUUGGUGGCACC -22
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|
Star sequence |
Ete-Mir-9851_3p* |
mirBase accession | None |
Sequence |
35- UGGCACCAGUACUGGCGGUGGC -57
Get sequence
|