MirGeneDB ID | Bge-Mir-137-P13-v1 |
Family name |
MIR-137 (all species) |
Seed |
UAUUGCU |
Species |
Cockroach (Blattella germanica) |
MiRBase ID |
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Paralogues |
Bge-Mir-137-P13-v2
Bge-Mir-137-P14-v1
Bge-Mir-137-P14-v2
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Orthologues |
Asu-Mir-137
Bfl-Mir-137
Cbr-Mir-137
Cel-Mir-137
Cgi-Mir-137
Cte-Mir-137
Dan-Mir-137
Dma-Mir-137
Dme-Mir-137
Dmo-Mir-137
Dpu-Mir-137
Dsi-Mir-137
Dya-Mir-137
Ebu-Mir-137
Esc-Mir-137
Hme-Mir-137
Isc-Mir-137
Lan-Mir-137
Lgi-Mir-137
Obi-Mir-137
Sko-Mir-137
Spu-Mir-137
Xbo-Mir-137
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Node of Origin (locus) |
B. germanica
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Node of Origin (family) |
Bilateria
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Genome context (Bger_2.0) |
JPZV02060341.1: 557-617 [+]
Ensembl
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Precursor (pre-Mir +30nt flank) |
CGGGAAGAAGACAUAAUAACUUGGUUGGCCACGCGUAUUCUUGGGGAAUUAACACACAUGUAGCGAUGUUAUUGCUUGAGAAUACACGUAGCUGACAAGUUUGAGCAUCGCCGGAUCAACA
Get precursor sequence
|
Structure | 10 20 30 40 50 60
CGGGAAGAAGACAUAAU---| G UG C C UG G U CACAU
AACUUG U GC ACG GUAUUCU GG AAU AACA G
UUGAAC A CG UGC CAUAAGA UC UUA UUGU U
ACAACUAGGCCGCUACGAGU^ - GU A A GU G - AGCGA
. 110 100 90 80 70 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
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Motifs | CNNC at 3p(+17) |
Tissue expression
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Ad |
Ad |
Ny |
Ny |
Ny |
Ny |
Ny |
Ny |
Ny |
Ny |
Ov |
Co |
Co |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
No |
No |
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Star sequence |
Bge-Mir-137-P13-v1_5p* |
mirBase accession | None |
Sequence |
0- ACGCGUAUUCUUGGGGAAUUAACA -24
Get sequence
|
Mature sequence |
Bge-Mir-137-P13-v1_3p |
mirBase accession | None |
Sequence |
38- UUAUUGCUUGAGAAUACACGUAG -61
Get sequence
|