MirGeneDB ID | Bge-Mir-210-v2 |
Family name |
MIR-210 (all species) |
Seed |
GCUGCUG |
Species |
Cockroach (Blattella germanica) |
MiRBase ID |
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Paralogues |
Bge-Mir-210-v1
|
Orthologues |
Aae-Mir-210-v2
Aca-Mir-210
Ami-Mir-210
Bfl-Mir-210
Bla-Mir-210
Bta-Mir-210
Cfa-Mir-210
Cgi-Mir-210
Cli-Mir-210
Cmi-Mir-210
Cpi-Mir-210
Cpo-Mir-210
Dan-Mir-210-v2
Dma-Mir-210
Dme-Mir-210-v2
Dmo-Mir-210-v2
Dno-Mir-210
Dpu-Mir-210
Dre-Mir-210
Dsi-Mir-210-v2
Dya-Mir-210-v2
Ebu-Mir-210
Efe-Mir-210
Ete-Mir-210
Gga-Mir-210
Gja-Mir-210
Gmo-Mir-210
Hsa-Mir-210
Isc-Mir-210
Lan-Mir-210
Lch-Mir-210
Lgi-Mir-210
Loc-Mir-210
Mal-Mir-210
Mdo-Mir-210
Mml-Mir-210
Mmu-Mir-210
Mun-Mir-210
Npo-Mir-210
Oan-Mir-210
Ocu-Mir-210
Pbv-Mir-210
Pma-Mir-210
Pmi-Mir-210-v2
Rno-Mir-210
Sha-Mir-210
Sko-Mir-210
Spt-Mir-210
Spu-Mir-210-v2
Tca-Mir-210-v2
Tgu-Mir-210
Tni-Mir-210
Xtr-Mir-210
|
Node of Origin (locus) |
Bilateria
|
Node of Origin (family) |
Bilateria
|
Genome context (Bger_2.0) |
KZ615127.1: 109417-109476 [+]
Ensembl
|
Precursor (pre-Mir +30nt flank) |
AUCAACCAAAGGAGAGGAGUAACCCACGGCAGCUGCUGGACACUGCACAAGAUUAGCGAUUAAAACUCUUGUGCGUGUGACAGCGGCUAUUGUAGUUGCUCGCCGCGACGACAUCACCAU
Get precursor sequence
|
Structure | 10 20 30 40 50
AUCAACCAAAGGAGAGG---| CC C G- U UUAGCG
AGUAAC ACGG AGCUGCUG ACAC GCACAAGA A
UCGUUG UGUU UCGGCGAC UGUG CGUGUUCU U
UACCACUACAGCAGCGCCGC^ A- A AG - CAAAAU
. 110 100 90 80 70 60 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | CNNC at 3p(+17) |
Tissue expression
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Ad |
Ad |
Ny |
Ny |
Ny |
Ny |
Ny |
Ny |
Ny |
Ny |
Ov |
Co |
Co |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
No |
No |
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Mature sequence |
Bge-Mir-210-v2_5p |
mirBase accession | None |
Sequence |
0- AGCUGCUGGACACUGCACAAGAU -23
Get sequence
|
Co-mature sequence |
Bge-Mir-210-v2_3p |
mirBase accession | None |
Sequence |
37- CUUGUGCGUGUGACAGCGGCUAU -60
Get sequence
|