| MirGeneDB ID | Bge-Mir-92-o65 |
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| Family name |
MIR-92 (all species) |
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| Seed |
AUUGCAC |
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| Species |
Cockroach (Blattella germanica) |
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| MiRBase ID |
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| Paralogues |
Bge-Mir-92-o63
Bge-Mir-92-o64
Bge-Mir-92-o66
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| Orthologues |
Asu-Mir-92
Cel-Mir-92
Esc-Mir-92
Isc-Mir-92
Obi-Mir-92
Sme-Mir-92
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| Node of Origin (locus) |
B. germanica
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| Node of Origin (family) |
Bilateria
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Genome context
(Bger_2.0) |
KZ616963.1: 116285-116343 [-]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
AACAACAUGAAGAUGUUGCUAGCUCCUUUCAGGCUGUGACUUGUGCAAGUUUUGUGAUAUAUGAUCAAAUUGCACUUGUCCCGGCCUGAAGGUACUAGUUUGACACAUGCUCAUCCCAU
Get precursor sequence
|
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| Structure | 10 20 30 40 50
AACAACAUGAAGAUGUU---| CU U U UU GU UGAUA
GCUAG CCUU CAGGCUG GAC GUGCAA UUUG \
UGAUC GGAA GUCCGGC CUG CACGUU AAAC U
UACCCUACUCGUACACAGUU^ AU - C UU -- UAGUA
110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
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| Comment | It is not clear either from phylogenetic or syntenic information how many Mir-92 genes were present in the last common ancestor of bilaterians and how the vertebrate Mir-92s relate to the invertebrate Mir-92s and thus these multiple paralogues in invertebrates are classified here as orphans pending additional data. |
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| 3' NTU |
No
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| Motifs | UG at 5p(-14) |
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Tissue expression
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| Ad |
Ad |
Ny |
Ny |
Ny |
Ny |
Ny |
Ny |
Ny |
Ny |
Ov |
Co |
Co |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
No |
No |
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| Star sequence |
Bge-Mir-92-o65_5p* |
| mirBase accession | None |
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| Sequence |
0- AGGCUGUGACUUGUGCAAGUUUUG -24
Get sequence
|
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| Mature sequence |
Bge-Mir-92-o65_3p |
| mirBase accession | None |
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| Sequence |
37- AAUUGCACUUGUCCCGGCCUGA -59
Get sequence
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