Mir-96-P2

MirGeneDB ID

Bge-Mir-96-P2

Family name

MIR-96 (all species)

Seed

UUGGCAC

Species

Cockroach (Blattella germanica)

MiRBase ID

Paralogues

Bge-Mir-96-P3

Orthologues

Aae-Mir-96-P2 Aca-Mir-96-P2 Ami-Mir-96-P2 Asu-Mir-96-P2 Bfl-Mir-96-P2f Bfl-Mir-96-P2g Bfl-Mir-96-P2h Bfl-Mir-96-P2i Bfl-Mir-96-P2j Bfl-Mir-96-P2k Bla-Mir-96-P2f Bla-Mir-96-P2g Bla-Mir-96-P2h Bla-Mir-96-P2i Bla-Mir-96-P2j Bla-Mir-96-P2k Bta-Mir-96-P2 Cbr-Mir-96-P2p Cbr-Mir-96-P2q Cel-Mir-96-P2 Cfa-Mir-96-P2 Cgi-Mir-96-P2l Cgi-Mir-96-P2m Cin-Mir-96-P2 Cli-Mir-96-P2 Cmi-Mir-96-P2 Cpi-Mir-96-P2 Cpo-Mir-96-P2 Csc-Mir-96-P2w Cte-Mir-96-P2 Dan-Mir-96-P2 Dma-Mir-96-P2 Dme-Mir-96-P2 Dno-Mir-96-P2 Dpu-Mir-96-P2 Dre-Mir-96-P2a Dsi-Mir-96-P2 Dya-Mir-96-P2 Ebu-Mir-96-P2e Efe-Mir-96-P2n Efe-Mir-96-P2o Ete-Mir-96-P2 Gga-Mir-96-P2 Gja-Mir-96-P2 Gmo-Mir-96-P2a Hme-Mir-96-P2 Hsa-Mir-96-P2 Isc-Mir-96-P2 Lan-Mir-96-P2 Lch-Mir-96-P2 Lgi-Mir-96-P2 Loc-Mir-96-P2 Lpo-Mir-96-P2r Lpo-Mir-96-P2s-v1 Lpo-Mir-96-P2s-v2 Lpo-Mir-96-P2t-v1 Lpo-Mir-96-P2t-v2 Lpo-Mir-96-P2u Lpo-Mir-96-P2v-v1 Lpo-Mir-96-P2v-v2 Mal-Mir-96-P2a Mal-Mir-96-P2b Mdo-Mir-96-P2 Mml-Mir-96-P2 Mmu-Mir-96-P2 Mun-Mir-96-P2 Npo-Mir-96-P2 Oan-Mir-96-P2 Obi-Mir-96-P2 Ocu-Mir-96-P2 Ovu-Mir-96-P2 Pbv-Mir-96-P2 Pfl-Mir-96-P2 Pma-Mir-96-P2o1 Pmi-Mir-96-P2 Rno-Mir-96-P2 Sha-Mir-96-P2 Sko-Mir-96-P2 Spt-Mir-96-P2 Spu-Mir-96-P2 Sto-Mir-96-P2 Tca-Mir-96-P2 Tgu-Mir-96-P2 Tni-Mir-96-P2a Tni-Mir-96-P2b Xla-Mir-96-P2c Xla-Mir-96-P2d Xtr-Mir-96-P2

Node of Origin (locus)

Bilateria

Node of Origin (family)

Bilateria

Genome context
(Bger_2.0)

KZ614838.1: 241058-241116 [-] Ensembl

Precursor
(pre-Mir +30nt flank)

UCAUCAAAAUCUUAAGCAAAGCCUGUGCGCCUUGGCACUGGAAGAAUUCACAGAUAUUUUUGAAAUCGUGGAUCUCCCUGUGCCAAAGCAUACGGCAACGUCACCCAAGAAGUACGUCC

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Structure

        10        20           30        40        50          
UCAUCAAAAUCUUAAGCAAA---|  U   C  C       U  A   A     A  UAUUU 
                       GCC GUG GC UUGGCAC GG AGA UUCAC GA     \
                       CGG CAU CG AACCGUG CC UCU AGGUG CU     U
CCUGCAUGAAGAACCCACUGCAA^  -   A  A       U  C   -     -  AAAGU 
       110       100         90        80         70

Deep sequencing

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3' NTU

Motifs

Tissue expression

Ad	Ad	Ny	Ny	Ny	Ny	Ny	Ny	Ny	Ny	Ov	Co	Co	Em	Em	Em	Em	Em	Em	Em	Em	Em	Em	No	No

Mature sequence

Bge-Mir-96-P2_5p

mirBase accession

None

Sequence

0- CUUGGCACUGGAAGAAUUCACAGA -24

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Star sequence

Bge-Mir-96-P2_3p*

mirBase accession

None

Sequence

37- GUGGAUCUCCCUGUGCCAAAGC -59

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