MirGeneDB ID | Csc-Mir-190-P18 |
Family name |
MIR-190 (all species) |
Seed |
GAUAUGU |
Species |
Arizona bark scorpion (Centruroides sculpturatus) |
MiRBase ID |
|
Paralogues |
Csc-Mir-190-P19
|
Orthologues |
Aae-Mir-190
Asu-Mir-190
Bfl-Mir-190
Bge-Mir-190
Bla-Mir-190
Bpl-Mir-190
Cbr-Mir-190
Cel-Mir-190
Cgi-Mir-190
Cte-Mir-190
Dan-Mir-190
Dma-Mir-190
Dme-Mir-190
Dmo-Mir-190
Dpu-Mir-190
Dsi-Mir-190
Dya-Mir-190
Esc-Mir-190
Hme-Mir-190
Isc-Mir-190
Npo-Mir-190
Obi-Mir-190
Ovu-Mir-190
Pfl-Mir-190
Pmi-Mir-190
Sko-Mir-190
Tca-Mir-190
Xbo-Mir-190
|
Node of Origin (locus) |
C. sculpturatus
|
Node of Origin (family) |
Bilateria
|
Genome context (GCF_000671375.1_CSC) |
NW_019384336.1: 223558-223616 [-]
Ensembl
|
Precursor (pre-Mir +30nt flank) |
GGUUAUGACAAAACUAUUCUCCUAAUUGUCAGAUAUGUUUGAUAUUCUUGGUUGUGGCUUAUAUCCAACCAAGAAUCAGACAUAUGCUGAUGAGGAGGAGACUACACUACGGAAGCGUC
Get precursor sequence
|
Structure | 10 20 30 40 50
GGUUAUGACAAAACUAU- AA UG -| AU UGGCU
UCUCCU U UCAG AUAUGUUUGAU UCUUGGUUG \
AGAGGA A AGUC UAUACAGACUA AGAACCAAC U
CUGCGAAGGCAUCACAUC GG GU G^ -- CUAUA
110 100 90 80 70 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
Unknown
|
Motifs | CNNC at 3p(+17) |
Tissue expression
|
|
Mature sequence |
Csc-Mir-190-P18_5p |
mirBase accession | None |
Sequence |
0- AGAUAUGUUUGAUAUUCUUGGUUG -24
Get sequence
|
Star sequence |
Csc-Mir-190-P18_3p* |
mirBase accession | None |
Sequence |
37- ACCAAGAAUCAGACAUAUGCUG -59
Get sequence
|