Mir-190

MirGeneDB ID

Dmo-Mir-190

Family name

MIR-190 (all species)

Seed

GAUAUGU

Species

Fruit fly (Drosophila mojavensis)

MiRBase ID

Paralogues

Orthologues

Aae-Mir-190 Aca-Mir-190-P1 Aca-Mir-190-P3 Ami-Mir-190-P1 Ami-Mir-190-P3 Asu-Mir-190 Bfl-Mir-190 Bge-Mir-190 Bla-Mir-190 Bpl-Mir-190 Bta-Mir-190-P1 Bta-Mir-190-P3 Cbr-Mir-190 Cel-Mir-190 Cfa-Mir-190-P1 Cfa-Mir-190-P3 Cgi-Mir-190 Cli-Mir-190-P1 Cmi-Mir-190-P1 Cmi-Mir-190-P3 Cpi-Mir-190-P1 Cpi-Mir-190-P3 Cpo-Mir-190-P1 Cpo-Mir-190-P3 Csc-Mir-190-P18 Csc-Mir-190-P19 Cte-Mir-190 Dan-Mir-190 Dma-Mir-190 Dme-Mir-190 Dno-Mir-190-P1 Dno-Mir-190-P3 Dpu-Mir-190 Dre-Mir-190-P1b Dre-Mir-190-P3 Dsi-Mir-190 Dya-Mir-190 Ebu-Mir-190-P5 Ebu-Mir-190-P6 Efe-Mir-190-P9 Efe-Mir-190-P10 Efe-Mir-190-P11 Efe-Mir-190-P12 Esc-Mir-190 Ete-Mir-190-P1 Ete-Mir-190-P3 Gga-Mir-190-P1 Gga-Mir-190-P3 Gja-Mir-190-P1 Gja-Mir-190-P3 Gmo-Mir-190-P1a Gmo-Mir-190-P1b Gmo-Mir-190-P3 Hme-Mir-190 Hsa-Mir-190-P1 Hsa-Mir-190-P3 Isc-Mir-190 Lan-Mir-190-P7 Lan-Mir-190-P8 Lch-Mir-190-P1 Lch-Mir-190-P3 Lgi-Mir-190-v1 Lgi-Mir-190-v2 Loc-Mir-190-P1 Lpo-Mir-190-P14 Lpo-Mir-190-P15 Lpo-Mir-190-P16 Lpo-Mir-190-P17 Mal-Mir-190-P1a Mal-Mir-190-P1b Mal-Mir-190-P3 Mdo-Mir-190-P1 Mdo-Mir-190-P3 Mml-Mir-190-P1 Mml-Mir-190-P3 Mmu-Mir-190-P1 Mmu-Mir-190-P3 Mun-Mir-190-P1 Npo-Mir-190 Oan-Mir-190-P1 Oan-Mir-190-P3 Obi-Mir-190 Ocu-Mir-190-P1 Ocu-Mir-190-P3 Ovu-Mir-190 Pbv-Mir-190-P1 Pbv-Mir-190-P3 Pfl-Mir-190 Pma-Mir-190-o1 Pma-Mir-190-o2 Pma-Mir-190-o3 Pmi-Mir-190 Rno-Mir-190-P1c Rno-Mir-190-P1d Rno-Mir-190-P3 Sha-Mir-190-P1 Sha-Mir-190-P3 Sko-Mir-190 Sme-Mir-190-P20 Sme-Mir-190-P21 Sme-Mir-190-P22 Spt-Mir-190-P1 Spt-Mir-190-P3 Sto-Mir-190-P1 Sto-Mir-190-P3 Tca-Mir-190 Tgu-Mir-190-P1 Tgu-Mir-190-P3 Tni-Mir-190-P1a Tni-Mir-190-P1b Tni-Mir-190-P3 Xbo-Mir-190 Xla-Mir-190-P3a Xla-Mir-190-P3b Xtr-Mir-190-P3

Node of Origin (locus)

Bilateria

Node of Origin (family)

Bilateria

Genome context
(Dmoj_caf1)

scaffold_6680: 4536936-4536999 [+] Ensembl

Precursor
(pre-Mir +30nt flank)

UAUCCACUACCUCAUCUAACGAUUCCAGUGAGAUAUGUUUGAUAUUCUUGGUUGUUACAUUCAAAAGUUCACCCAGGAAUCAAACAUAUUAUUACUGUGAUCGCUUAAACUCUACUAAAAACGA

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Structure

        10          20        30         40        50        60  
UAUCCACUACCUCAUCUAA--    UC      -|           AU      U  UUACAUU 
                     CGAU  CAGUGA GAUAUGUUUGAU  UCUUGG UG       \
                     GCUA  GUCAUU UUAUACAAACUA  AGGACC AC       C
AGCAAAAAUCAUCUCAAAUUC    GU      A^           --      C  UUGAAAA 
  120       110       100        90        80          70

Deep sequencing

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3' NTU

Motifs

CNNC at 3p(+17)

Tissue expression

Em	Fe	Ma	Ma

Mature sequence

Dmo-Mir-190_5p

mirBase accession

None

Sequence

0- AGAUAUGUUUGAUAUUCUUGGUUG -24

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Co-mature sequence

Dmo-Mir-190_3p

mirBase accession

None

Sequence

41- CCCAGGAAUCAAACAUAUUAUUA -64

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