MirGeneDB ID | Csc-Mir-210-P14 |
Family name |
MIR-210 (all species) |
Seed |
UGUGCGU |
Species |
Arizona bark scorpion (Centruroides sculpturatus) |
MiRBase ID |
|
Paralogues |
Csc-Mir-210-P13a
Csc-Mir-210-P13b
|
Orthologues |
Aca-Mir-210
Ami-Mir-210
Bfl-Mir-210
Bla-Mir-210
Bta-Mir-210
Cfa-Mir-210
Cgi-Mir-210
Cli-Mir-210
Cmi-Mir-210
Cpi-Mir-210
Cpo-Mir-210
Dma-Mir-210
Dno-Mir-210
Dpu-Mir-210
Dre-Mir-210
Ebu-Mir-210
Efe-Mir-210
Ete-Mir-210
Gga-Mir-210
Gja-Mir-210
Gmo-Mir-210
Hsa-Mir-210
Isc-Mir-210
Lan-Mir-210
Lch-Mir-210
Lgi-Mir-210
Loc-Mir-210
Mal-Mir-210
Mdo-Mir-210
Mml-Mir-210
Mmu-Mir-210
Mun-Mir-210
Npo-Mir-210
Oan-Mir-210
Ocu-Mir-210
Pbv-Mir-210
Pma-Mir-210
Rno-Mir-210
Sha-Mir-210
Sko-Mir-210
Spt-Mir-210
Tgu-Mir-210
Tni-Mir-210
Xla-Mir-210-P14
Xtr-Mir-210
|
Node of Origin (locus) |
C. sculpturatus
|
Node of Origin (family) |
Bilateria
|
Genome context (GCF_000671375.1_CSC) |
NW_019385932.1: 51022-51078 [-]
Ensembl
|
Precursor (pre-Mir +30nt flank) |
UGCUGGUUCUUCACGUGAGACGUCCACAGUAGCUGCUGGACACGGCACAAGAUAUCCGUCGAUUCUUGUGCGUGUGACAGCGGCUAUCGUAUAACGUCAUGUAUCAUCCAGACGGAA
Get precursor sequence
|
Structure | 10 20 30 40 50
UGCUGGUUCUUCACGUGA- CC- A G-| G UAUCC
GACGU AC GUAGCUGCUG ACACG CACAAGA \
CUGCA UG UAUCGGCGAC UGUGC GUGUUCU G
AAGGCAGACCUACUAUGUA AUA C AG^ - UAGCU
110 100 90 80 70 60 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
Unknown
|
Motifs | CNNC at 3p(+17) |
Tissue expression
|
|
Star sequence |
Csc-Mir-210-P14_5p* |
mirBase accession | None |
Sequence |
0- AGCUGCUGGACACGGCACAAGA -22
Get sequence
|
Mature sequence |
Csc-Mir-210-P14_3p |
mirBase accession | None |
Sequence |
35- UUGUGCGUGUGACAGCGGCUAU -57
Get sequence
|