Mir-210-P13b

MirGeneDB ID

Csc-Mir-210-P13b

Family name

MIR-210 (all species)

Seed

UGUGCGU

Species

Arizona bark scorpion (Centruroides sculpturatus)

MiRBase ID

Paralogues

Csc-Mir-210-P13a Csc-Mir-210-P14

Orthologues

Aca-Mir-210 Ami-Mir-210 Bfl-Mir-210 Bla-Mir-210 Bta-Mir-210 Cfa-Mir-210 Cgi-Mir-210 Cli-Mir-210 Cmi-Mir-210 Cpi-Mir-210 Cpo-Mir-210 Dma-Mir-210 Dno-Mir-210 Dpu-Mir-210 Dre-Mir-210 Ebu-Mir-210 Efe-Mir-210 Ete-Mir-210 Gga-Mir-210 Gja-Mir-210 Gmo-Mir-210 Hsa-Mir-210 Isc-Mir-210 Lan-Mir-210 Lch-Mir-210 Lgi-Mir-210 Loc-Mir-210 Mal-Mir-210 Mdo-Mir-210 Mml-Mir-210 Mmu-Mir-210 Mun-Mir-210 Npo-Mir-210 Oan-Mir-210 Ocu-Mir-210 Pbv-Mir-210 Pma-Mir-210 Rno-Mir-210 Sha-Mir-210 Sko-Mir-210 Spt-Mir-210 Tgu-Mir-210 Tni-Mir-210 Xla-Mir-210-P13 Xtr-Mir-210

Node of Origin (locus)

C. sculpturatus

Node of Origin (family)

Bilateria

Genome context
(GCF_000671375.1_CSC)

NW_019384588.1: 110383-110448 [-] Ensembl

Precursor
(pre-Mir +30nt flank)

AAAAUAAAAUAAAAUCUAGGCGUUCACCCCAGUCGCUGUGCUGCGUGCAAGAUGUGAAUUUUUAAAACUUAUCUUGUGCGUGUGACAGCGGCUAUUGUGUUACGUCACGAGUCUUCGAAUAUCAAG

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Structure

        10          20         30         40        50        60  
AAAAUAAAAUAAAAUCUA--     U-   CCC         -| U   UG     UGUGAAUUU 
                    GGCGU  CAC   AGUCGCUGU GC GCG  CAAGA         \
                    CUGCA  GUG   UCGGCGACA UG UGC  GUUCU         U
GAACUAUAAGCUUCUGAGCA     UU   UUA         G^ -   GU     AUUCAAAAU 
    120       110       100        90         80        70

Deep sequencing

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3' NTU

Unknown

Motifs

CNNC at 3p(+17), UGUG in loop

Tissue expression

Fe	Fe	Fe	Fe	Ma	Ma	Ma

Star sequence

Csc-Mir-210-P13b_5p*

mirBase accession

None

Sequence

0- AGUCGCUGUGCUGCGUGCAAGA -22

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Mature sequence

Csc-Mir-210-P13b_3p

mirBase accession

None

Sequence

43- UUGUGCGUGUGACAGCGGCUAUU -66

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